Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
19786127
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0794500-01 | Rice | mitochondrion | 86.87 | 96.59 |
| OQU90838 | Sorghum | cytosol, mitochondrion | 85.34 | 94.89 |
| Zm00001d034420_P002 | Maize | plasma membrane | 84.9 | 94.4 |
| HORVU4Hr1G061100.1 | Barley | cytosol | 15.1 | 93.24 |
| GSMUA_Achr2P12720_001 | Banana | cytosol, mitochondrion | 80.53 | 89.54 |
| GSMUA_Achr5P02870_001 | Banana | cytosol, mitochondrion | 80.31 | 89.29 |
| Solyc10g078550.1.1 | Tomato | extracellular | 78.12 | 86.86 |
| PGSC0003DMT400021552 | Potato | cytosol, mitochondrion | 78.12 | 86.86 |
| KRG94812 | Soybean | cytosol, mitochondrion | 75.93 | 84.43 |
| AT5G18170.1 | Thale cress | cytosol, mitochondrion | 75.71 | 84.18 |
| KRH06711 | Soybean | cytosol, mitochondrion | 75.71 | 84.18 |
| CDY21157 | Canola | cytosol, mitochondrion | 75.27 | 83.7 |
| Bra036428.1-P | Field mustard | cytosol, mitochondrion | 75.27 | 83.7 |
| AT3G03910.1 | Thale cress | cytosol, mitochondrion | 75.27 | 83.7 |
| CDY29969 | Canola | cytosol, mitochondrion | 75.27 | 83.7 |
| CDY25453 | Canola | cytosol, mitochondrion | 74.84 | 83.21 |
| KRH08494 | Soybean | mitochondrion | 74.84 | 83.21 |
| Bra002139.1-P | Field mustard | mitochondrion | 74.4 | 82.73 |
| CDY38492 | Canola | mitochondrion | 74.18 | 82.48 |
| KRH70158 | Soybean | extracellular, mitochondrion | 73.74 | 82.0 |
| TraesCS2B01G409300.1 | Wheat | mitochondrion | 71.99 | 80.05 |
| TraesCS1B01G166200.2 | Wheat | cytosol | 22.54 | 76.87 |
| KRG88968 | Soybean | cytosol | 35.01 | 75.83 |
| CDY64900 | Canola | cytoskeleton, cytosol, mitochondrion | 33.48 | 75.37 |
| CDY64896 | Canola | mitochondrion | 75.27 | 75.27 |
| VIT_08s0007g07400.t01 | Wine grape | cytoskeleton, golgi, peroxisome | 79.21 | 75.26 |
| TraesCS1B01G472700.1 | Wheat | cytosol | 17.94 | 60.74 |
| Bra031964.1-P | Field mustard | mitochondrion | 67.61 | 54.59 |
| CDY50862 | Canola | cytosol, mitochondrion, plastid | 73.96 | 51.84 |
| TraesCS7B01G165800.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 13.13 | 47.24 |
| TraesCS7B01G339000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 25.38 | 37.06 |
| TraesCS3B01G227100.1 | Wheat | cytosol | 22.32 | 15.81 |
Protein Annotations
| MapMan:25.1.6.1 | Gene3D:3.40.50.10860 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006520 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0016639 | GO:GO:0055114 |
| InterPro:Glu/Leu/Phe/Val_DH | InterPro:Glu/Leu/Phe/Val_DH_AS | InterPro:Glu/Leu/Phe/Val_DH_C | InterPro:Glu/Leu/Phe/Val_DH_dimer_dom | InterPro:Glu_DH | InterPro:NAD(P)-bd_dom_sf |
| InterPro:NAD_bind_Glu_DH | PFAM:PF00208 | PFAM:PF02812 | PIRSF:PIRSF000185 | PRINTS:PR00082 | ScanProsite:PS00074 |
| PANTHER:PTHR11606 | PANTHER:PTHR11606:SF18 | SMART:SM00839 | SUPFAM:SSF51735 | SUPFAM:SSF53223 | SignalP:SignalP-noTM |
| EnsemblPlantsGene:TraesCS5B01G437100 | EnsemblPlants:TraesCS5B01G437100.2 | TIGR:cd01076 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr5B:-:610500314..610503552
Molecular Weight (calculated)
49241.1 Da
IEP (calculated)
7.677
GRAVY (calculated)
-0.140
Length
457 amino acids
Sequence
(BLAST)
(BLAST)
001: MHTAYLKLLH SLSAAASPTL ALTTNTSPLL YSYSARRLRR GIPSSRMNAL AATSRNFKQA AKLLGLDSKL EKSLLIPFRE IKVECTIPKD DGTLASYVGF
101: RVQHDNARGP MKGGIRYHHE VDPDEVNALA QLMTWKTAVA NIPYGGAKGG IGCSPGDLSI SELERLTRVF TQKIHDLIGI HTDVPAPDMG TNAQTMAWIL
201: DEYSKFHGYS PAVVTGKPVD LGGSLGRDAA TGRGVLFATE ALLAEHGKGI AGQRFVIQGF GNVGSWAAQL ITEAGGKVIA ISDVTGAVKN SNGIDIAKLM
301: KHSAENRGIK GFDGGDAVDP TSLLTEECDV LIPAALGGVI NKDNADGIKA KYIIEAANHP TDPEADEILA NKGVLILPDI LANSGGVTVS YFEWVQNIQG
401: FMWDEEKVNR ELKTYMTRAF RDTKEMCRSH HCDLRMGAFT LGVNRVARAT VLRGWEA
101: RVQHDNARGP MKGGIRYHHE VDPDEVNALA QLMTWKTAVA NIPYGGAKGG IGCSPGDLSI SELERLTRVF TQKIHDLIGI HTDVPAPDMG TNAQTMAWIL
201: DEYSKFHGYS PAVVTGKPVD LGGSLGRDAA TGRGVLFATE ALLAEHGKGI AGQRFVIQGF GNVGSWAAQL ITEAGGKVIA ISDVTGAVKN SNGIDIAKLM
301: KHSAENRGIK GFDGGDAVDP TSLLTEECDV LIPAALGGVI NKDNADGIKA KYIIEAANHP TDPEADEILA NKGVLILPDI LANSGGVTVS YFEWVQNIQG
401: FMWDEEKVNR ELKTYMTRAF RDTKEMCRSH HCDLRMGAFT LGVNRVARAT VLRGWEA
001: MNALAATNRN FKLAARLLGL DSKLEKSLLI PFREIKVECT IPKDDGTLAS FVGFRVQHDN ARGPMKGGIR YHPEVDPDEV NALAQLMTWK TAVAKIPYGG
101: AKGGIGCDPS KLSISELERL TRVFTQKIHD LIGIHTDVPA PDMGTGPQTM AWILDEYSKF HGYSPAVVTG KPIDLGGSLG RDAATGRGVM FGTEALLNEH
201: GKTISGQRFV IQGFGNVGSW AAKLISEKGG KIVAVSDITG AIKNKDGIDI PALLKHTKEH RGVKGFDGAD PIDPNSILVE DCDILVPAAL GGVINRENAN
301: EIKAKFIIEA ANHPTDPDAD EILSKKGVVI LPDIYANSGG VTVSYFEWVQ NIQGFMWEEE KVNDELKTYM TRSFKDLKEM CKTHSCDLRM GAFTLGVNRV
401: AQATILRGWG A
101: AKGGIGCDPS KLSISELERL TRVFTQKIHD LIGIHTDVPA PDMGTGPQTM AWILDEYSKF HGYSPAVVTG KPIDLGGSLG RDAATGRGVM FGTEALLNEH
201: GKTISGQRFV IQGFGNVGSW AAKLISEKGG KIVAVSDITG AIKNKDGIDI PALLKHTKEH RGVKGFDGAD PIDPNSILVE DCDILVPAAL GGVINRENAN
301: EIKAKFIIEA ANHPTDPDAD EILSKKGVVI LPDIYANSGG VTVSYFEWVQ NIQGFMWEEE KVNDELKTYM TRSFKDLKEM CKTHSCDLRM GAFTLGVNRV
401: AQATILRGWG A
Arabidopsis Description
GDH1Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UEK9]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.