Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY64900 | Canola | cytoskeleton, cytosol, mitochondrion | 81.08 | 29.56 |
| KRG88968 | Soybean | cytosol | 59.46 | 20.85 |
| TraesCS5A01G434100.1 | Wheat | cytosol, mitochondrion | 93.24 | 16.79 |
| Zm00001d034420_P002 | Maize | plasma membrane | 91.89 | 16.55 |
| Os03t0794500-01 | Rice | mitochondrion | 91.89 | 16.55 |
| OQU90838 | Sorghum | cytosol, mitochondrion | 91.89 | 16.55 |
| Solyc10g078550.1.1 | Tomato | extracellular | 90.54 | 16.3 |
| PGSC0003DMT400021552 | Potato | cytosol, mitochondrion | 90.54 | 16.3 |
| GSMUA_Achr5P02870_001 | Banana | cytosol, mitochondrion | 89.19 | 16.06 |
| GSMUA_Achr2P12720_001 | Banana | cytosol, mitochondrion | 89.19 | 16.06 |
| AT5G18170.1 | Thale cress | cytosol, mitochondrion | 85.14 | 15.33 |
| KRH06711 | Soybean | cytosol, mitochondrion | 85.14 | 15.33 |
| KRG94812 | Soybean | cytosol, mitochondrion | 85.14 | 15.33 |
| Bra002139.1-P | Field mustard | mitochondrion | 85.14 | 15.33 |
| CDY38492 | Canola | mitochondrion | 85.14 | 15.33 |
| CDY25453 | Canola | cytosol, mitochondrion | 85.14 | 15.33 |
| TraesCS5D01G442000.1 | Wheat | mitochondrion, plastid | 93.24 | 15.13 |
| TraesCS5B01G437100.2 | Wheat | extracellular | 93.24 | 15.1 |
| Bra036428.1-P | Field mustard | cytosol, mitochondrion | 83.78 | 15.09 |
| CDY21157 | Canola | cytosol, mitochondrion | 83.78 | 15.09 |
| CDY29969 | Canola | cytosol, mitochondrion | 83.78 | 15.09 |
| AT3G03910.1 | Thale cress | cytosol, mitochondrion | 82.43 | 14.84 |
| KRH70158 | Soybean | extracellular, mitochondrion | 81.08 | 14.6 |
| KRH08494 | Soybean | mitochondrion | 81.08 | 14.6 |
| CDY64896 | Canola | mitochondrion | 83.78 | 13.57 |
| VIT_08s0007g07400.t01 | Wine grape | cytoskeleton, golgi, peroxisome | 85.14 | 13.1 |
| Bra031964.1-P | Field mustard | mitochondrion | 83.78 | 10.95 |
| CDY50862 | Canola | cytosol, mitochondrion, plastid | 83.78 | 9.51 |
| TraesCS7B01G165800.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 8.11 | 4.72 |
| HORVU3Hr1G048870.1 | Barley | plastid | 25.68 | 2.48 |
| TraesCS1B01G472700.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS7D01G412300.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS7B01G339000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 0.0 | 0.0 |
| TraesCS6D01G031800.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS5D01G021500.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS1D01G322800.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS1D01G080500.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS1B01G166200.2 | Wheat | cytosol | 0.0 | 0.0 |
| HORVU2Hr1G093030.1 | Barley | cytosol, mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G061100.1 | EnsemblPlantsGene:HORVU4Hr1G061100 | Gene3D:3.40.50.10860 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006520 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0016639 | GO:GO:0055114 |
| InterPro:Glu/Leu/Phe/Val_DH_AS | InterPro:Glu/Leu/Phe/Val_DH_dimer_dom | PANTHER:PTHR11606 | PANTHER:PTHR11606:SF18 | PFAM:PF02812 | ScanProsite:PS00074 |
| SUPFAM:SSF53223 | UniParc:UPI000B4728AF | UniProt:A0A287PA49 | MapMan:25.1.6.1 | : | : |
Description
No Description!
Coordinates
chrchr4H:-:513365281..513366545
Molecular Weight (calculated)
7880.4 Da
IEP (calculated)
4.360
GRAVY (calculated)
-0.061
Length
74 amino acids
Sequence
(BLAST)
(BLAST)
1: SVDPDEVNAL SQLMTWKTVV DNIPYGGAKG GIGCSLGDLS ISELERLTRV FTQKIHDLIG IHTDVPAPDM GTNA
001: MNALAATNRN FRHASRILGL DSKIERSLMI PFREIKVECT IPKDDGTLVS YIGFRVQHDN ARGPMKGGIR YHPEVDPDEV NALAQLMTWK TAVADIPYGG
101: AKGGIGCSPR DLSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTNAQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG REAATGRGVV FATEALLAEY
201: GKSIQGLTFV IQGFGNVGTW AAKLIHEKGG KVVAVSDITG AIRNPEGIDI NALIKHKDAT GSLNDFNGGD AMNSDELLIH ECDVLIPCAL GGVLNKSVQK
301: LHSSNQHQS
101: AKGGIGCSPR DLSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTNAQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG REAATGRGVV FATEALLAEY
201: GKSIQGLTFV IQGFGNVGTW AAKLIHEKGG KVVAVSDITG AIRNPEGIDI NALIKHKDAT GSLNDFNGGD AMNSDELLIH ECDVLIPCAL GGVLNKSVQK
301: LHSSNQHQS
Arabidopsis Description
GDH2Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UEW8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.