Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G080500.1 | Wheat | cytosol | 98.15 | 98.15 |
| TraesCS1D01G322800.1 | Wheat | cytosol | 54.63 | 78.67 |
| TraesCS7D01G412300.1 | Wheat | cytosol | 67.59 | 43.2 |
| TraesCS5D01G021500.1 | Wheat | cytosol | 50.93 | 40.74 |
| TraesCS1B01G472700.1 | Wheat | cytosol | 42.59 | 34.07 |
| TraesCS5A01G434100.1 | Wheat | cytosol, mitochondrion | 71.3 | 18.73 |
| Os03t0794500-01 | Rice | mitochondrion | 66.67 | 17.52 |
| TraesCS5D01G442000.1 | Wheat | mitochondrion, plastid | 71.3 | 16.89 |
| OQU90838 | Sorghum | cytosol, mitochondrion | 63.89 | 16.79 |
| KRG88968 | Soybean | cytosol | 31.48 | 16.11 |
| Zm00001d034420_P002 | Maize | plasma membrane | 61.11 | 16.06 |
| GSMUA_Achr2P12720_001 | Banana | cytosol, mitochondrion | 59.26 | 15.57 |
| CDY29969 | Canola | cytosol, mitochondrion | 54.63 | 14.36 |
| CDY21157 | Canola | cytosol, mitochondrion | 54.63 | 14.36 |
| Bra036428.1-P | Field mustard | cytosol, mitochondrion | 54.63 | 14.36 |
| GSMUA_Achr5P02870_001 | Banana | cytosol, mitochondrion | 54.63 | 14.36 |
| KRH08494 | Soybean | mitochondrion | 54.63 | 14.36 |
| KRG94812 | Soybean | cytosol, mitochondrion | 53.7 | 14.11 |
| AT3G03910.1 | Thale cress | cytosol, mitochondrion | 53.7 | 14.11 |
| Solyc10g078550.1.1 | Tomato | extracellular | 52.78 | 13.87 |
| PGSC0003DMT400021552 | Potato | cytosol, mitochondrion | 51.85 | 13.63 |
| KRH06711 | Soybean | cytosol, mitochondrion | 51.85 | 13.63 |
| AT5G18170.1 | Thale cress | cytosol, mitochondrion | 51.85 | 13.63 |
| KRH70158 | Soybean | extracellular, mitochondrion | 50.93 | 13.38 |
| CDY38492 | Canola | mitochondrion | 50.0 | 13.14 |
| CDY25453 | Canola | cytosol, mitochondrion | 50.0 | 13.14 |
| Bra002139.1-P | Field mustard | mitochondrion | 50.0 | 13.14 |
| VIT_08s0007g07400.t01 | Wine grape | cytoskeleton, golgi, peroxisome | 55.56 | 12.47 |
| CDY64896 | Canola | mitochondrion | 51.85 | 12.25 |
| TraesCS2D01G388800.1 | Wheat | mitochondrion | 44.44 | 10.76 |
| Bra031964.1-P | Field mustard | mitochondrion | 50.93 | 9.72 |
| CDY50862 | Canola | cytosol, mitochondrion, plastid | 50.0 | 8.28 |
| TraesCS3D01G206100.4 | Wheat | cytosol | 17.59 | 2.93 |
| CDY64900 | Canola | cytoskeleton, cytosol, mitochondrion | 0.93 | 0.49 |
| HORVU4Hr1G061100.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G031800.1 | EnsemblPlantsGene:TraesCS6D01G031800 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006520 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0055114 | InterPro:Glu/Leu/Phe/Val_DH_C |
| InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR11606 | PANTHER:PTHR11606:SF18 | PFAM:PF00208 | SUPFAM:SSF51735 | MapMan:25.1.6.1 |
Description
No Description!
Coordinates
chr6D:+:13476731..13478087
Molecular Weight (calculated)
11755.0 Da
IEP (calculated)
6.507
GRAVY (calculated)
-0.289
Length
108 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVKNSNGID IANLMKHSAE NRGIKGFDGG DAVDLISLLT EECDVLIPAA LGGVINNVRR QAVPTCRWRR AAPSLSRDNV DAIKAKYIIE AANHPTDPEA
101: DERRVCWS
101: DERRVCWS
001: MNALAATNRN FKLASRLLGL DSKLEKSLLI PFREIKVECT IPKDDGTLAS FVGFRVQHDN ARGPMKGGIR YHPEVEPDEV NALAQLMTWK TAVAKIPYGG
101: AKGGIGCDPS ELSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTGPQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG RDAATGRGVL FATEALLNEH
201: GKTISGQRFA IQGFGNVGSW AAKLISDKGG KIVAVSDVTG AIKNNNGIDI LSLLEHAEEN RGIKGFDGAD SIDPDSILVE DCDILVPAAL GGVINRENAN
301: EIKAKFIIEG ANHPTDPEAD EILKKKGVMI LPDIYANSGG VTVSYFEWVQ VRLENQDCMT
101: AKGGIGCDPS ELSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTGPQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG RDAATGRGVL FATEALLNEH
201: GKTISGQRFA IQGFGNVGSW AAKLISDKGG KIVAVSDVTG AIKNNNGIDI LSLLEHAEEN RGIKGFDGAD SIDPDSILVE DCDILVPAAL GGVINRENAN
301: EIKAKFIIEG ANHPTDPEAD EILKKKGVMI LPDIYANSGG VTVSYFEWVQ VRLENQDCMT
Arabidopsis Description
GSH3Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178VBI2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.