Factsheet for TraesCS7B01G339000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, cytosol

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, mitochondrion
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G322800.1	Wheat	cytosol	20.77	86.67
TraesCS1B01G166200.2	Wheat	cytosol	21.09	49.25
TraesCS7B01G165800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	18.21	44.88
TraesCS1B01G472700.1	Wheat	cytosol	18.53	42.96
TraesCS5A01G434100.1	Wheat	cytosol, mitochondrion	37.7	28.71
Os03t0794500-01	Rice	mitochondrion	35.46	27.01
OQU90838	Sorghum	cytosol, mitochondrion	34.19	26.03
TraesCS5B01G437100.2	Wheat	extracellular	37.06	25.38
Zm00001d034420_P002	Maize	plasma membrane	32.91	25.06
KRG88968	Soybean	cytosol	16.61	24.64
GSMUA_Achr2P12720_001	Banana	cytosol, mitochondrion	32.27	24.57
GSMUA_Achr5P02870_001	Banana	cytosol, mitochondrion	30.03	22.87
Solyc10g078550.1.1	Tomato	extracellular	28.75	21.9
KRH08494	Soybean	mitochondrion	28.75	21.9
CDY29969	Canola	cytosol, mitochondrion	28.43	21.65
CDY21157	Canola	cytosol, mitochondrion	28.43	21.65
Bra036428.1-P	Field mustard	cytosol, mitochondrion	28.43	21.65
PGSC0003DMT400021552	Potato	cytosol, mitochondrion	28.43	21.65
KRG94812	Soybean	cytosol, mitochondrion	28.11	21.41
AT5G18170.1	Thale cress	cytosol, mitochondrion	27.8	21.17
AT3G03910.1	Thale cress	cytosol, mitochondrion	27.8	21.17
KRH06711	Soybean	cytosol, mitochondrion	27.48	20.92
KRH70158	Soybean	extracellular, mitochondrion	27.16	20.68
CDY25453	Canola	cytosol, mitochondrion	26.84	20.44
Bra002139.1-P	Field mustard	mitochondrion	26.84	20.44
CDY38492	Canola	mitochondrion	26.52	20.19
TraesCS2B01G409300.1	Wheat	mitochondrion	25.56	19.46
VIT_08s0007g07400.t01	Wine grape	cytoskeleton, golgi, peroxisome	29.07	18.92
CDY64896	Canola	mitochondrion	27.48	18.82
Bra031964.1-P	Field mustard	mitochondrion	25.56	14.13
CDY50862	Canola	cytosol, mitochondrion, plastid	26.52	12.73
TraesCS3B01G227100.1	Wheat	cytosol	9.27	4.5
CDY64900	Canola	cytoskeleton, cytosol, mitochondrion	0.64	0.99
HORVU4Hr1G061100.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS7B01G339000.1	EnsemblPlantsGene:TraesCS7B01G339000	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0006520
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	InterPro:Glu/Leu/Phe/Val_DH_C
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR11606	PANTHER:PTHR11606:SF18	PFAM:PF00208	SMART:SM00839	SUPFAM:SSF51735
MapMan:25.1.6.1	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:593347619..593350586

Molecular Weight (calculated)

34116.1 Da

IEP (calculated)

8.376

GRAVY (calculated)

-0.300

Length

313 amino acids

Sequence
(BLAST)

001: MVFGNTGSWA AQLITEAGGK VVSIRDVTGT VKNSNGIDIA KLMKHLAENR GIKGFDGGDA VDPTSLLTEE CDVLIPAALG GVINKDNADA IKAKYIIEAV
101: NHPTDPEANK ARTPTFCHKT KLHLLTHSRI DCQQRNVHVR GADSGKEGRA DPIGHHGQLR GSDGELLRVG RWASKRHLTF SDHAAIGVIQ AGSMESPAQH
201: RHRLIRAGAS MTNLLYSAHN PTQQARAMST IGVALGCMLA STVIKVAIES VEAVLGNAER ESIEHKSMLL WLNRLMDADM LEDFEDETDL NLWAATMKKI
301: KMPHNMRSMQ KRI

Best Arabidopsis Sequence Match ( AT3G03910.1 )
(BLAST)

001: MNALAATNRN FKLASRLLGL DSKLEKSLLI PFREIKVECT IPKDDGTLAS FVGFRVQHDN ARGPMKGGIR YHPEVEPDEV NALAQLMTWK TAVAKIPYGG
101: AKGGIGCDPS ELSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTGPQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG RDAATGRGVL FATEALLNEH
201: GKTISGQRFA IQGFGNVGSW AAKLISDKGG KIVAVSDVTG AIKNNNGIDI LSLLEHAEEN RGIKGFDGAD SIDPDSILVE DCDILVPAAL GGVINRENAN
301: EIKAKFIIEG ANHPTDPEAD EILKKKGVMI LPDIYANSGG VTVSYFEWVQ NIQGFMWDEE KVNRELKTYM TRGFKDLKEM CQTHSCDLRM GAFTLGINRV
401: AQATTIRGWG S

Arabidopsis Description

GSH3Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178VBI2]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.