Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH33206 | Soybean | nucleus | 70.27 | 18.31 |
| KRH72035 | Soybean | nucleus | 67.57 | 17.54 |
| VIT_08s0007g09010.t01 | Wine grape | cytosol | 68.92 | 17.53 |
| EES02036 | Sorghum | cytosol | 66.22 | 17.25 |
| Zm00001d011891_P001 | Maize | extracellular | 67.57 | 17.24 |
| Os01t0939700-01 | Rice | plastid | 67.57 | 17.12 |
| TraesCS3B01G522300.1 | Wheat | plastid | 66.22 | 16.9 |
| TraesCS3A01G478800.2 | Wheat | plastid | 66.22 | 16.9 |
| Zm00001d042150_P001 | Maize | cytosol | 41.89 | 16.76 |
| TraesCS3D01G473000.1 | Wheat | plastid | 64.86 | 16.55 |
| PGSC0003DMT400033074 | Potato | cytosol | 63.51 | 16.55 |
| Solyc04g016360.2.1 | Tomato | extracellular | 63.51 | 16.55 |
| CDY23842 | Canola | cytosol | 62.16 | 16.31 |
| Bra000230.1-P | Field mustard | cytosol | 62.16 | 16.2 |
| CDY35409 | Canola | cytosol | 62.16 | 16.2 |
| CDY22529 | Canola | cytosol | 62.16 | 16.2 |
| AT2G41530.1 | Thale cress | cytosol | 62.16 | 16.2 |
| CDX79930 | Canola | cytosol | 60.81 | 16.01 |
| Bra004627.1-P | Field mustard | cytosol | 60.81 | 15.9 |
| Zm00001d028378_P001 | Maize | mitochondrion | 5.41 | 4.44 |
| Zm00001d042151_P001 | Maize | cytosol, nucleus, plastid, vacuole | 4.05 | 3.3 |
| GSMUA_Achr5P08110_001 | Banana | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| KEGG:00680+3.1.2.12 | Gene3D:3.40.50.1820 | MapMan:50.3.1 | InterPro:AB_hydrolase | InterPro:Esterase_put | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0018738 | GO:GO:0046294 | EnsemblPlantsGene:GSMUA_Achr5G08120_001 | EnsemblPlants:GSMUA_Achr5P08120_001 | EnsemblPlants:GSMUA_Achr5T08120_001 | InterPro:IPR029058 |
| UniProt:M0SWP1 | PFAM:PF00756 | PANTHER:PTHR10061 | InterPro:S-formylglutathione_hydrol | SUPFAM:SSF53474 | UniParc:UPI000296B199 |
Description
S-formylglutathione hydrolase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G08120_001]
Coordinates
chr5:+:5868234..5868633
Molecular Weight (calculated)
8532.0 Da
IEP (calculated)
6.618
GRAVY (calculated)
-0.536
Length
74 amino acids
Sequence
(BLAST)
(BLAST)
1: MSWTNDRKLC FAGQGEDDKF LHDQLLPHNF EDACKGANAP LVLRMQPGYD HSYYFISTFI DDHIHHHAKA LKCA
001: MASGLSEIGS TKMFDGYNKR YKHFSETLGC SMTFSIYFPP SASSSHKSPV LYWLSGLTCT DENFIIKSGA QRAASTHGIA LVAPDTSPRG LNVEGEADSY
101: DFGVGAGFYL NATQEKWKNW RMYDYVVKEL PKLLSENFSQ LDTTKASISG HSMGGHGALT IYLRNLDKYK SVSAFAPITN PINCAWGQKA FTNYLGDNKA
201: AWEEYDATCL ISKYNNLSAT ILIDQGENDQ FYPDQLLPSK FEEACKKVNA PLLLRLHPGY DHSYYFIATF IEDHISHHAQ ALEL
101: DFGVGAGFYL NATQEKWKNW RMYDYVVKEL PKLLSENFSQ LDTTKASISG HSMGGHGALT IYLRNLDKYK SVSAFAPITN PINCAWGQKA FTNYLGDNKA
201: AWEEYDATCL ISKYNNLSAT ILIDQGENDQ FYPDQLLPSK FEEACKKVNA PLLLRLHPGY DHSYYFIATF IEDHISHHAQ ALEL
Arabidopsis Description
SFGHS-formylglutathione hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q8LAS8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.