Factsheet for VIT_08s0007g09010.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 4
vacuole 1
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g016360.2.1	Tomato	extracellular	83.85	85.92
PGSC0003DMT400033074	Potato	cytosol	83.85	85.92
KRH33206	Soybean	nucleus	81.79	83.8
KRH72035	Soybean	nucleus	81.44	83.16
CDY23842	Canola	cytosol	80.41	82.98
CDX79930	Canola	cytosol	80.07	82.92
Bra004627.1-P	Field mustard	cytosol	80.07	82.33
AT2G41530.1	Thale cress	cytosol	80.07	82.04
GSMUA_Achr5P08110_001	Banana	plasma membrane	31.62	81.42
Bra000230.1-P	Field mustard	cytosol	78.69	80.63
CDY35409	Canola	cytosol	78.35	80.28
CDY22529	Canola	cytosol	78.35	80.28
Zm00001d011891_P001	Maize	extracellular	73.54	73.79
EES02036	Sorghum	cytosol	71.48	73.24
Os01t0939700-01	Rice	plastid	72.16	71.92
TraesCS3A01G478800.2	Wheat	plastid	71.48	71.72
TraesCS3B01G522300.1	Wheat	plastid	71.48	71.72
TraesCS3D01G473000.1	Wheat	plastid	71.13	71.38
GSMUA_Achr5P08120_001	Banana	cytosol, mitochondrion, nucleus	17.53	68.92
Zm00001d028378_P001	Maize	mitochondrion	19.24	62.22
Zm00001d042151_P001	Maize	cytosol, nucleus, plastid, vacuole	16.49	52.75
Zm00001d042150_P001	Maize	cytosol	32.99	51.89

Protein Annotations

KEGG:00680+3.1.2.12	EntrezGene:100253701	wikigene:100253701	Gene3D:3.40.50.1820	MapMan:50.3.1	InterPro:AB_hydrolase
ProteinID:CBI29800	ProteinID:CBI29800.3	UniProt:D7THS4	InterPro:Esterase_put	EMBL:FN595991	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0018738	GO:GO:0046294
GO:GO:0052689	InterPro:IPR029058	EntrezGene:LOC100253701	wikigene:LOC100253701	PFAM:PF00756	PANTHER:PTHR10061
InterPro:S-formylglutathione_hydrol	MEROPS:S09.A38	SUPFAM:SSF53474	TIGR:TC63695	TIGR:TC63903	TIGRFAMs:TIGR02821
UniParc:UPI00015CB0DB	ArrayExpress:VIT_08s0007g09010	EnsemblPlantsGene:VIT_08s0007g09010	EnsemblPlants:VIT_08s0007g09010.t01	RefSeq:XP_002284489	RefSeq:XP_002284489.1
RefSeq:XP_002284491	RefSeq:XP_002284491.1	:	:	:	:

Description

S-formylglutathione hydrolase [Source:UniProtKB/TrEMBL;Acc:D7THS4]

Coordinates

chr8:+:22343964..22354882

Molecular Weight (calculated)

32655.7 Da

IEP (calculated)

6.835

GRAVY (calculated)

-0.313

Length

291 amino acids

Sequence
(BLAST)

001: MEAKPTEISG SKMFGGYNKR FKHFSPTLGC SMTFHVYFPP LPSPSHKFPV LYWLSGLSCT DENFIIKSGA QRVASSEGIA LVAPDTSPRG LNVEGEADSW
101: DFGVGAGFYL NATQEKWKNW QMYDYVVKEL PKVLSENFAQ LDTSRASISG HSMGGHGALT IYLKNLDKYK SVSAFAPIVN PMNCPWGQKA FTNYLGGNKA
201: DWEEYDATCL ISKFNDVSAT ILIDQGEDDK FLHDQLLPHK FEEACKNAKV PLLLRLQPGY DHSYYFIATF IDHHIQHHAQ ALNMCFKPLH P

Best Arabidopsis Sequence Match ( AT2G41530.1 )
(BLAST)

001: MASGLSEIGS TKMFDGYNKR YKHFSETLGC SMTFSIYFPP SASSSHKSPV LYWLSGLTCT DENFIIKSGA QRAASTHGIA LVAPDTSPRG LNVEGEADSY
101: DFGVGAGFYL NATQEKWKNW RMYDYVVKEL PKLLSENFSQ LDTTKASISG HSMGGHGALT IYLRNLDKYK SVSAFAPITN PINCAWGQKA FTNYLGDNKA
201: AWEEYDATCL ISKYNNLSAT ILIDQGENDQ FYPDQLLPSK FEEACKKVNA PLLLRLHPGY DHSYYFIATF IEDHISHHAQ ALEL

Arabidopsis Description

SFGHS-formylglutathione hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q8LAS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.