CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35409	Canola	cytosol	98.94	98.94
Bra000230.1-P	Field mustard	cytosol	98.24	98.24
CDX79930	Canola	cytosol	93.66	94.66
CDY23842	Canola	cytosol	93.31	93.97
AT2G41530.1	Thale cress	cytosol	92.61	92.61
PGSC0003DMT400033074	Potato	cytosol	80.63	80.63
Solyc04g016360.2.1	Tomato	extracellular	80.28	80.28
VIT_08s0007g09010.t01	Wine grape	cytosol	80.28	78.35
KRH72035	Soybean	nucleus	78.17	77.89
KRH33206	Soybean	nucleus	77.82	77.82
Zm00001d011891_P001	Maize	extracellular	75.7	74.14
EES02036	Sorghum	cytosol	73.94	73.94
TraesCS3B01G522300.1	Wheat	plastid	72.18	70.69
Os01t0939700-01	Rice	plastid	72.54	70.55
TraesCS3A01G478800.2	Wheat	plastid	71.13	69.66
TraesCS3D01G473000.1	Wheat	plastid	70.77	69.31
GSMUA_Achr5P08110_001	Banana	plasma membrane	27.46	69.03
Zm00001d028378_P001	Maize	mitochondrion	21.13	66.67
GSMUA_Achr5P08120_001	Banana	cytosol, mitochondrion, nucleus	16.2	62.16
Zm00001d042151_P001	Maize	cytosol, nucleus, plastid, vacuole	18.66	58.24
Zm00001d042150_P001	Maize	cytosol	33.45	51.35

Protein Annotations

KEGG:00680+3.1.2.12	Gene3D:3.40.50.1820	MapMan:50.3.1	GO:A0A078GB13	UniProt:A0A078GB13	InterPro:AB_hydrolase
EnsemblPlants:CDY22529	ProteinID:CDY22529	ProteinID:CDY22529.1	InterPro:Esterase_put	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0018738	GO:GO:0046294	GO:GO:0052689
EnsemblPlantsGene:GSBRNA2T00019115001	InterPro:IPR029058	PFAM:PF00756	PANTHER:PTHR10061	MetaCyc:PWY-1801	InterPro:S-formylglutathione_hydrol
SUPFAM:SSF53474	TIGRFAMs:TIGR02821	UniParc:UPI0004EE117E	SEG:seg	:	:

Description

BnaC03g23390DS-formylglutathione hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078GB13]

Coordinates

chrLK032132:-:420739..422811

Molecular Weight (calculated)

31830.6 Da

IEP (calculated)

6.939

GRAVY (calculated)

-0.333

Length

284 amino acids

Sequence
(BLAST)

001: MESGLSEIGS TKMFDGFNKR YKHYSETLGC SMTFSIYFPP SASSSRRSPV LYWLSGLTCT DENFIIKSGA QRAASTRGIA LVVPDTSPRG LNIEGEADSY
101: DFGVGAGFYL NATQEKWKNW RMYDYIVKEL PKLLSGNFTQ LDTTRASISG HSMGGHGALT IYLKNLDKYK SVSAFAPIAN PINCQWGQKA FTNYLGDNKA
201: AWEEYDATCL ISKFNNLSAT ILIDQGENDQ FFPDQLLPNK FEEACKKVNA PLLLRLHPGY DHSYYFIATF IEDHITHHSQ ALKL

Best Arabidopsis Sequence Match ( AT2G41530.1 )
(BLAST)

001: MASGLSEIGS TKMFDGYNKR YKHFSETLGC SMTFSIYFPP SASSSHKSPV LYWLSGLTCT DENFIIKSGA QRAASTHGIA LVAPDTSPRG LNVEGEADSY
101: DFGVGAGFYL NATQEKWKNW RMYDYVVKEL PKLLSENFSQ LDTTKASISG HSMGGHGALT IYLRNLDKYK SVSAFAPITN PINCAWGQKA FTNYLGDNKA
201: AWEEYDATCL ISKYNNLSAT ILIDQGENDQ FYPDQLLPSK FEEACKKVNA PLLLRLHPGY DHSYYFIATF IEDHISHHAQ ALEL

Arabidopsis Description

SFGHS-formylglutathione hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q8LAS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.