CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011891_P001	Maize	extracellular	93.66	91.72
TraesCS3B01G522300.1	Wheat	plastid	84.51	82.76
Os01t0939700-01	Rice	plastid	84.86	82.53
TraesCS3A01G478800.2	Wheat	plastid	84.15	82.41
TraesCS3D01G473000.1	Wheat	plastid	83.1	81.38
CDY23842	Canola	cytosol	74.65	75.18
KRH33206	Soybean	nucleus	74.65	74.65
Bra004627.1-P	Field mustard	cytosol	74.3	74.56
CDY35409	Canola	cytosol	74.3	74.3
CDX79930	Canola	cytosol	73.24	74.02
CDY22529	Canola	cytosol	73.94	73.94
Bra000230.1-P	Field mustard	cytosol	73.59	73.59
AT2G41530.1	Thale cress	cytosol	73.59	73.59
KRH72035	Soybean	nucleus	73.24	72.98
VIT_08s0007g09010.t01	Wine grape	cytosol	73.24	71.48
Solyc04g016360.2.1	Tomato	extracellular	70.77	70.77
PGSC0003DMT400033074	Potato	cytosol	70.42	70.42
GSMUA_Achr5P08120_001	Banana	cytosol, mitochondrion, nucleus	17.25	66.22
Zm00001d042150_P001	Maize	cytosol	41.55	63.78
GSMUA_Achr5P08110_001	Banana	plasma membrane	25.35	63.72

Protein Annotations

KEGG:00680+3.1.2.12	Gene3D:3.40.50.1820	MapMan:50.3.1	EntrezGene:8081319	InterPro:AB_hydrolase	UniProt:C5XHR2
EnsemblPlants:EES02036	ProteinID:EES02036	ProteinID:EES02036.1	InterPro:Esterase_put	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0018738	GO:GO:0046294	GO:GO:0052689
InterPro:IPR029058	PFAM:PF00756	PANTHER:PTHR10061	MetaCyc:PWY-1801	InterPro:S-formylglutathione_hydrol	EnsemblPlantsGene:SORBI_3003G420900
SUPFAM:SSF53474	unigene:Sbi.1291	TIGRFAMs:TIGR02821	UniParc:UPI0001A84B35	RefSeq:XP_002456916.1	SEG:seg

Description

hypothetical protein

Coordinates

chr3:+:72597195..72603526

Molecular Weight (calculated)

31623.5 Da

IEP (calculated)

6.786

GRAVY (calculated)

-0.268

Length

284 amino acids

Sequence
(BLAST)

001: MAAALEQLSR SKMFDGFNLR FRHQSATLGC AMTFSIYMPP SPASNIPVLY WLSGLTCTDE NFIMKSGAQR AAAAHGIALV SPDTSPRGLN IEGESDSYDF
101: GVGAGFYLNA TNEKWKNWRM YDYVVKELPK VLSDNFEQLN TSQASIFGHS MGGHGALTIY LKNTDKYKSV SAFAPIANPI NCPWGQKAFS NYLGPTKSDW
201: EEYDATCLIK KNSNVPTPIL IDQGDADKFL AEQQLLPHNF EEACKAVGAT LILRMQPRYD HSYYFIATFM DDHIAHHAKF LKSA

Best Arabidopsis Sequence Match ( AT2G41530.1 )
(BLAST)

001: MASGLSEIGS TKMFDGYNKR YKHFSETLGC SMTFSIYFPP SASSSHKSPV LYWLSGLTCT DENFIIKSGA QRAASTHGIA LVAPDTSPRG LNVEGEADSY
101: DFGVGAGFYL NATQEKWKNW RMYDYVVKEL PKLLSENFSQ LDTTKASISG HSMGGHGALT IYLRNLDKYK SVSAFAPITN PINCAWGQKA FTNYLGDNKA
201: AWEEYDATCL ISKYNNLSAT ILIDQGENDQ FYPDQLLPSK FEEACKKVNA PLLLRLHPGY DHSYYFIATF IEDHISHHAQ ALEL

Arabidopsis Description

SFGHS-formylglutathione hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q8LAS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.