Factsheet for Zm00001d011891_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 5
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02036	Sorghum	cytosol	91.72	93.66
TraesCS3B01G522300.1	Wheat	plastid	86.21	86.21
Zm00001d028378_P001	Maize	mitochondrion	26.55	85.56
TraesCS3A01G478800.2	Wheat	plastid	85.17	85.17
TraesCS3D01G473000.1	Wheat	plastid	84.83	84.83
KRH33206	Soybean	nucleus	74.83	76.41
CDY23842	Canola	cytosol	74.14	76.24
CDY35409	Canola	cytosol	74.48	76.06
Zm00001d042151_P001	Maize	cytosol, nucleus, plastid, vacuole	23.79	75.82
CDY22529	Canola	cytosol	74.14	75.7
Bra004627.1-P	Field mustard	cytosol	73.79	75.62
Bra000230.1-P	Field mustard	cytosol	73.79	75.35
CDX79930	Canola	cytosol	72.76	75.09
AT2G41530.1	Thale cress	cytosol	73.45	75.0
KRH72035	Soybean	nucleus	73.45	74.74
VIT_08s0007g09010.t01	Wine grape	cytosol	73.79	73.54
Solyc04g016360.2.1	Tomato	extracellular	70.0	71.48
PGSC0003DMT400033074	Potato	cytosol	69.66	71.13
GSMUA_Achr5P08120_001	Banana	cytosol, mitochondrion, nucleus	17.24	67.57
Zm00001d042150_P001	Maize	cytosol	40.69	63.78
GSMUA_Achr5P08110_001	Banana	plasma membrane	24.83	63.72

Protein Annotations

KEGG:00680+3.1.2.12	EntrezGene:100282053	Gene3D:3.40.50.1820	MapMan:50.3.1	InterPro:AB_hydrolase	ProteinID:AQK98267.1
UniProt:B6T2Y5	EMBL:BT087337	EMBL:EU959350	InterPro:Esterase_put	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0018738	GO:GO:0046294	GO:GO:0052689
InterPro:IPR029058	PFAM:PF00756	PANTHER:PTHR10061	InterPro:S-formylglutathione_hydrol	MEROPS:S09.A38	SUPFAM:SSF53474
TIGRFAMs:TIGR02821	UniParc:UPI000182CBC8	EnsemblPlantsGene:Zm00001d011891	EnsemblPlants:Zm00001d011891_P001	EnsemblPlants:Zm00001d011891_T001	SEG:seg

Description

S-formylglutathione hydrolase

Coordinates

chr8:-:164106171..164115399

Molecular Weight (calculated)

31887.7 Da

IEP (calculated)

6.596

GRAVY (calculated)

-0.204

Length

290 amino acids

Sequence
(BLAST)

001: MAVAPPTAAA LEQLSSSKMF DGFNLRFRHQ SATLGCAMTF SIYLPPSPAS NLPVLYWLSG LTCTDENFII KSGAQRAAAA HGIALVAPDT SPRGLNIEGE
101: SDSYDFGVGA GFYLNATNEK WKNWRMYDYI VKELPKVLSD NFEQLNTSQA SIFGHSMGGH GALTIYLKNT DKYKSVSAFA PIANPINCPW GQKAFSNYLG
201: STKSDWEEYD ATCLIKKNSK VPTTILIDQG EADKFLAEQQ LLPHKFEEAC KAAGAALTLR MQPGYDHSYY FIATFVDDHI AHHAQFLKSA

Best Arabidopsis Sequence Match ( AT2G41530.1 )
(BLAST)

001: MASGLSEIGS TKMFDGYNKR YKHFSETLGC SMTFSIYFPP SASSSHKSPV LYWLSGLTCT DENFIIKSGA QRAASTHGIA LVAPDTSPRG LNVEGEADSY
101: DFGVGAGFYL NATQEKWKNW RMYDYVVKEL PKLLSENFSQ LDTTKASISG HSMGGHGALT IYLRNLDKYK SVSAFAPITN PINCAWGQKA FTNYLGDNKA
201: AWEEYDATCL ISKYNNLSAT ILIDQGENDQ FYPDQLLPSK FEEACKKVNA PLLLRLHPGY DHSYYFIATF IEDHISHHAQ ALEL

Arabidopsis Description

SFGHS-formylglutathione hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q8LAS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.