CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79930	Canola	cytosol	97.52	97.86
CDY22529	Canola	cytosol	93.97	93.31
AT2G41530.1	Thale cress	cytosol	93.97	93.31
CDY35409	Canola	cytosol	93.26	92.61
PGSC0003DMT400033074	Potato	cytosol	82.27	81.69
Solyc04g016360.2.1	Tomato	extracellular	82.27	81.69
VIT_08s0007g09010.t01	Wine grape	cytosol	82.98	80.41
KRH33206	Soybean	nucleus	79.79	79.23
KRH72035	Soybean	nucleus	79.79	78.95
EES02036	Sorghum	cytosol	75.18	74.65
Zm00001d011891_P001	Maize	extracellular	76.24	74.14
TraesCS3B01G522300.1	Wheat	plastid	73.76	71.72
GSMUA_Achr5P08110_001	Banana	plasma membrane	28.72	71.68
Os01t0939700-01	Rice	plastid	73.4	70.89
TraesCS3A01G478800.2	Wheat	plastid	72.69	70.69
TraesCS3D01G473000.1	Wheat	plastid	72.34	70.34
Zm00001d028378_P001	Maize	mitochondrion	21.28	66.67
GSMUA_Achr5P08120_001	Banana	cytosol, mitochondrion, nucleus	16.31	62.16
Zm00001d042151_P001	Maize	cytosol, nucleus, plastid, vacuole	18.09	56.04
Zm00001d042150_P001	Maize	cytosol	32.98	50.27

Protein Annotations

KEGG:00680+3.1.2.12	Gene3D:3.40.50.1820	MapMan:50.3.1	GO:A0A078GFD5	UniProt:A0A078GFD5	InterPro:AB_hydrolase
EnsemblPlants:CDY23842	ProteinID:CDY23842	ProteinID:CDY23842.1	InterPro:Esterase_put	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0018738	GO:GO:0046294	GO:GO:0052689
EnsemblPlantsGene:GSBRNA2T00024259001	InterPro:IPR029058	PFAM:PF00756	PANTHER:PTHR10061	MetaCyc:PWY-1801	InterPro:S-formylglutathione_hydrol
SUPFAM:SSF53474	TIGRFAMs:TIGR02821	UniParc:UPI0004EF41A5	:	:	:

Description

BnaC04g01950DS-formylglutathione hydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078GFD5]

Coordinates

chrLK032150:+:110680..112291

Molecular Weight (calculated)

31546.1 Da

IEP (calculated)

6.231

GRAVY (calculated)

-0.328

Length

282 amino acids

Sequence
(BLAST)

001: MESGLSEIGS TKMFDGYNKR YRHNSETLGC SMTFSIYFPP SSHRSPVLYW LSGLTCTDEN FIIKSGAQRA ASSHGIALVV PDTSPRGLNI EGEADSYDFG
101: VVGAGFYLNA TQEKWKNWRM YDYVVKELPK LLSENFSQLD TTRASISGHS MGGHGALTIY LKNLDKYKSV SAFAPIANPI NCPWGQKAFT NYLGDNKAAW
201: EEYDATCLIS KFNNLSATIL IDQGENDQFY PDQLLPNKFE EACKKVNAPL LVRLQPGYDH SYYFIATFIE DHISHHAQAL AL

Best Arabidopsis Sequence Match ( AT2G41530.1 )
(BLAST)

001: MASGLSEIGS TKMFDGYNKR YKHFSETLGC SMTFSIYFPP SASSSHKSPV LYWLSGLTCT DENFIIKSGA QRAASTHGIA LVAPDTSPRG LNVEGEADSY
101: DFGVGAGFYL NATQEKWKNW RMYDYVVKEL PKLLSENFSQ LDTTKASISG HSMGGHGALT IYLRNLDKYK SVSAFAPITN PINCAWGQKA FTNYLGDNKA
201: AWEEYDATCL ISKYNNLSAT ILIDQGENDQ FYPDQLLPSK FEEACKKVNA PLLLRLHPGY DHSYYFIATF IEDHISHHAQ ALEL

Arabidopsis Description

SFGHS-formylglutathione hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q8LAS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.