CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004627.1-P	Field mustard	cytosol	98.93	98.23
CDY23842	Canola	cytosol	97.86	97.52
CDY22529	Canola	cytosol	94.66	93.66
AT2G41530.1	Thale cress	cytosol	94.31	93.31
CDY35409	Canola	cytosol	93.95	92.96
PGSC0003DMT400033074	Potato	cytosol	82.56	81.69
Solyc04g016360.2.1	Tomato	extracellular	82.56	81.69
VIT_08s0007g09010.t01	Wine grape	cytosol	82.92	80.07
KRH72035	Soybean	nucleus	80.07	78.95
KRH33206	Soybean	nucleus	79.36	78.52
EES02036	Sorghum	cytosol	74.02	73.24
Zm00001d011891_P001	Maize	extracellular	75.09	72.76
GSMUA_Achr5P08110_001	Banana	plasma membrane	28.47	70.8
TraesCS3B01G522300.1	Wheat	plastid	72.6	70.34
Os01t0939700-01	Rice	plastid	72.6	69.86
TraesCS3A01G478800.2	Wheat	plastid	71.53	69.31
TraesCS3D01G473000.1	Wheat	plastid	71.17	68.97
Zm00001d028378_P001	Maize	mitochondrion	21.0	65.56
GSMUA_Achr5P08120_001	Banana	cytosol, mitochondrion, nucleus	16.01	60.81
Zm00001d042151_P001	Maize	cytosol, nucleus, plastid, vacuole	17.79	54.95
Zm00001d042150_P001	Maize	cytosol	32.74	49.73

Protein Annotations

KEGG:00680+3.1.2.12	Gene3D:3.40.50.1820	MapMan:50.3.1	GO:A0A078CSV5	InterPro:AB_hydrolase	EnsemblPlants:CDX79930
ProteinID:CDX79930	ProteinID:CDX79930.1	InterPro:Esterase_put	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0018738	GO:GO:0046294
EnsemblPlantsGene:GSBRNA2T00132786001	InterPro:IPR029058	PFAM:PF00756	PANTHER:PTHR10061	MetaCyc:PWY-1801	InterPro:S-formylglutathione_hydrol
SUPFAM:SSF53474	TIGRFAMs:TIGR02821	UniParc:UPI0004EEDDAF	:	:	:

Description

BnaA05g02260D

Coordinates

chrLK031819:+:888887..890563

Molecular Weight (calculated)

31460.0 Da

IEP (calculated)

5.799

GRAVY (calculated)

-0.342

Length

281 amino acids

Sequence
(BLAST)

001: MESGLSEIGS TKMFDGYNKR YKHNSETLGC SMTFSIYFPP SSHRSPVLYW LSGLTCTDEN FIIKSGAQRA ASTHGIALVV PDTSPRGLNI EGEADSYDFG
101: VGAGFYLNAT QEKWKNWSMY DYVVKELPKL LSENFPQLDT TRASISGHSM GGHGALTIYL KNLDKYKSVS AFAPIANPIN CPWGQKAFTN YLGDNKAAWE
201: EYDATCLISK FNNLSATILI DQGENDQFYP DQLLPNKFEE ACKKVNAPLL VRLQPGYDHS YYFIATFIED HISHHVQALE L

Best Arabidopsis Sequence Match ( AT2G41530.1 )
(BLAST)

001: MASGLSEIGS TKMFDGYNKR YKHFSETLGC SMTFSIYFPP SASSSHKSPV LYWLSGLTCT DENFIIKSGA QRAASTHGIA LVAPDTSPRG LNVEGEADSY
101: DFGVGAGFYL NATQEKWKNW RMYDYVVKEL PKLLSENFSQ LDTTKASISG HSMGGHGALT IYLRNLDKYK SVSAFAPITN PINCAWGQKA FTNYLGDNKA
201: AWEEYDATCL ISKYNNLSAT ILIDQGENDQ FYPDQLLPSK FEEACKKVNA PLLLRLHPGY DHSYYFIATF IEDHISHHAQ ALEL

Arabidopsis Description

SFGHS-formylglutathione hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q8LAS8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.