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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 2
  • plastid 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, peroxisome, plastid
Any Predictor:cytosol, mitochondrion, peroxisome, plastid
BaCelLo:cytosol
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d034388_P010 Maize peroxisome 94.12 93.16
EER90758 Sorghum peroxisome 90.29 89.77
EER90760 Sorghum peroxisome 84.71 84.4
Os03t0790700-01 Rice plasma membrane 80.59 80.83
Os03t0790900-01 Rice peroxisome, plastid 81.4 80.51
TraesCS5D01G435800.1 Wheat cytosol, peroxisome, plastid 79.34 80.22
TraesCS5B01G430100.1 Wheat cytosol, endoplasmic reticulum, peroxisome 80.51 80.16
TraesCS5D01G436200.1 Wheat cytosol, endoplasmic reticulum, peroxisome 80.59 80.12
TraesCS5B01G429700.1 Wheat cytosol 79.04 79.87
TraesCS5A01G428200.1 Wheat cytosol 80.07 79.61
TraesCS5D01G436000.1 Wheat peroxisome 78.53 79.52
TraesCS5B01G429800.1 Wheat cytosol 78.46 79.39
TraesCS5B01G429900.1 Wheat peroxisome 78.09 79.37
TraesCS5A01G427900.1 Wheat cytosol 78.53 79.35
TraesCS5A01G427700.1 Wheat cytosol, peroxisome, plastid 78.38 79.2
TraesCS5A01G427800.2 Wheat cytosol, peroxisome, plastid 78.16 79.09
TraesCS5B01G429600.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 78.68 79.08
TraesCS5D01G435900.2 Wheat cytosol 78.01 79.0
TraesCS5A01G428000.1 Wheat peroxisome 78.01 79.0
Os10t0138100-01 Rice cytosol 78.82 78.94
TraesCS5A01G427600.1 Wheat cytosol, peroxisome, plastid 78.53 78.7
TraesCS5D01G435700.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 78.09 78.15
OQU88862 Sorghum cytosol, endoplasmic reticulum, peroxisome 62.57 63.6
KXG34906 Sorghum plastid 63.31 63.17
OQU88864 Sorghum peroxisome 60.51 62.68
KXG34909 Sorghum mitochondrion, plastid 62.65 61.96
CDY55449 Canola mitochondrion 8.68 61.78
HORVU5Hr1G103920.1 Barley cytosol, mitochondrion 2.94 61.54
VIT_18s0041g02390.t01 Wine grape peroxisome 35.88 61.54
PGSC0003DMT400017595 Potato mitochondrion, peroxisome, plastid 22.35 61.29
CDY57476 Canola cytosol 8.53 61.05
PGSC0003DMT400017593 Potato peroxisome 14.71 60.61
PGSC0003DMT400048157 Potato peroxisome 34.04 60.6
VIT_18s0041g02410.t01 Wine grape cytosol 57.21 58.67
VIT_18s0041g02430.t01 Wine grape cytosol 58.53 58.62
VIT_06s0009g00770.t01 Wine grape cytosol, nucleus, peroxisome 58.82 58.61
EER98027 Sorghum plastid 60.44 58.34
VIT_18s0041g02400.t01 Wine grape cytosol 8.68 57.84
Solyc01g088230.2.1 Tomato peroxisome 11.99 57.6
PGSC0003DMT400022472 Potato cytosol, nucleus, peroxisome 57.5 57.46
CDX87955 Canola cytosol, peroxisome, plastid 54.93 57.37
CDY70226 Canola peroxisome 18.09 57.34
Bra034975.1-P Field mustard cytosol 52.43 57.32
Solyc11g071600.1.1 Tomato cytosol, nucleus, peroxisome 57.43 57.26
Solyc01g009230.2.1 Tomato cytosol 57.21 57.16
Bra019448.1-P Field mustard cytosol, peroxisome, plastid 54.56 57.12
CDY30951 Canola cytosol, peroxisome, plastid 53.38 57.03
PGSC0003DMT400048153 Potato cytosol 56.91 56.74
Solyc01g088170.2.1 Tomato cytosol, nucleus, peroxisome 56.62 56.33
Solyc11g071610.1.1 Tomato cytosol, nucleus, peroxisome 54.26 56.25
AT3G43600.1 Thale cress cytosol, nucleus, peroxisome 54.63 56.25
KRH73424 Soybean cytosol, mitochondrion, peroxisome, plastid 15.07 56.16
CDY09091 Canola cytosol 55.29 55.87
KRH73423 Soybean cytosol 56.03 55.82
Bra020140.1-P Field mustard cytosol 55.22 55.75
Solyc11g071590.1.1 Tomato peroxisome, plastid 4.63 55.75
CDY16582 Canola cytosol, peroxisome, plastid 55.88 55.68
CDX77070 Canola cytosol 53.9 55.49
KRH14734 Soybean cytosol, endoplasmic reticulum, peroxisome 55.88 55.47
AT5G20960.1 Thale cress cytosol, peroxisome, plastid 55.59 55.26
Solyc11g071620.1.1 Tomato cytosol 55.22 55.18
CDX92421 Canola cytosol, nucleus, peroxisome 55.37 55.16
AT2G27150.2 Thale cress cytosol, nucleus, peroxisome 53.82 54.95
Bra002347.1-P Field mustard cytosol 55.0 54.84
KRH73425 Soybean cytosol 55.07 54.79
AT1G04580.1 Thale cress cytosol, nucleus, peroxisome 53.68 54.6
PGSC0003DMT400050626 Potato cytosol 2.28 54.39
CDY18247 Canola cytosol, peroxisome, plastid 53.09 53.96
CDY48200 Canola peroxisome 38.09 53.96
AT1G02590.1 Thale cress cytosol, peroxisome, plastid 3.53 53.93
CDX89810 Canola cytosol, peroxisome, plastid 53.09 53.88
Bra015330.1-P Field mustard cytosol, peroxisome, plastid 53.01 53.85
PGSC0003DMT400017592 Potato cytosol, nucleus, peroxisome 35.07 53.66
CDY12326 Canola cytosol, peroxisome, plastid 54.04 53.45
Solyc11g071580.1.1 Tomato cytosol 48.75 53.25
Bra034325.1-P Field mustard cytosol 35.66 52.83
CDY67743 Canola plastid 20.88 52.3
Solyc01g088200.2.1 Tomato cytosol 18.24 48.92
Bra034974.1-P Field mustard cytosol 8.97 43.57
Solyc01g088220.2.1 Tomato cytosol 2.28 42.47
OQU92302 Sorghum cytosol 31.18 30.93
Protein Annotations
MapMan:11.1.1.7InterPro:2Fe-2S-bdInterPro:2Fe-2S-bd_dom_sfInterPro:2Fe-2S_ferredoxin-like_sfInterPro:2Fe-2S_ferredoxin-typeInterPro:2Fe2S_fd_BS
Gene3D:3.30.365.10InterPro:AldOxase/xan_DH_Mopterin-bdInterPro:AldOxase/xan_DH_Mopterin-bd_sfInterPro:Ald_Oxase/Xan_DH_a/bInterPro:Ald_Oxase/Xan_DH_a/b_sfInterPro:Ald_Oxase/xanthine_DH
UniProt:C5WY36InterPro:CO_DH_flav_CInterPro:CO_DH_flav_C_dom_sfncoils:CoilEnsemblPlants:EER90757ProteinID:EER90757
ProteinID:EER90757.2InterPro:FAD-bd_2InterPro:FAD-bd_2-like_sfGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005829GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009055GO:GO:0009987
GO:GO:0016491GO:GO:0016614GO:GO:0016903GO:GO:0022900GO:GO:0046872GO:GO:0050660
GO:GO:0051536GO:GO:0051537GO:GO:0055114GO:GO:0071949InterPro:IPR001041InterPro:IPR016166
InterPro:Mopterin_DH_FAD-bdPFAM:PF00111PFAM:PF00941PFAM:PF01315PFAM:PF01799PFAM:PF02738
PFAM:PF03450PIRSF:PIRSF000127ScanProsite:PS00197PFscan:PS51085PFscan:PS51387PANTHER:PTHR11908
PANTHER:PTHR11908:SF92SMART:SM01008SMART:SM01092EnsemblPlantsGene:SORBI_3001G062300SUPFAM:SSF47741SUPFAM:SSF54292
SUPFAM:SSF54665SUPFAM:SSF55447SUPFAM:SSF56003SUPFAM:SSF56176unigene:Sbi.7141UniParc:UPI0003C707AB
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr1:+:4620324..4628750
Molecular Weight (calculated)
146591.0 Da
IEP (calculated)
5.944
GRAVY (calculated)
-0.073
Length
1360 amino acids
Sequence
(BLAST)
0001: MGKAAAAVVL AVNGKRYEAA GADPSTTLLE FLRTQTPVRG PKLGCGEGGC GACVVLVSKY DPFTDEVTEF SASSCLTLLH SVDRCSVTTS EGIGNTKDGY
0101: HPVQQRLSGF HASQCGFCTP GMCMSIFSAL VKADKAADRP APPDGFSKLT SSEAEKAVSG NLCRCTGYRP IVDACKSFAA DVDLEDLGLN CFWKKGDEPA
0201: DVSKLPGYNS GAVCTFPEFL KSEIKSSIEQ VNSAAVPVSD DGWYRPKSID ELHRLFQSDS FDENSVKIVA SNTGSGVYKD QDLYDKYIDI KEIPELSVIN
0301: RSSKGVELGS VVSISKAIEV LSDGNVVFKK IADHLTKVAS PFVRNTATIG GNIIMAQRLQ FPSDIVTVLL AASTTVTIQV ASKTHCLALE EFLQQPPCDS
0401: RTLLLSIFIP DWSSDGITFE TFRAAPRPLG NAVSYVNSAF LARTSVDAGS RDHLIEDICL AFGAYGADHA IRARKVEDYL KGKTVSSSVI LEAVRLLKGT
0501: VKPSEGTTHP EYRISLAVSF LFTFLSSLGN SLNESEKVNG PNGLYSNGAT NGAIQHSLEK HLKFDSNDLP IRSRQEMFLT DEYKPVGKPI KKAGAEIQAS
0601: GEAVYVDDIP APKDCLYGAF IYSTHPHAHV KAINFKSSLA SQKVITVITA KDIPSGGQNI GSSFPGMGEE ALFADPVAEF AGQNIGVVIA ETQKYAYMAA
0701: KQAVIEYSTE NLQPPILTIE DAIQRNSYFQ TPPFLAPTPV GDYNQGMSEA DHKILSAEVK LESQYYFYME TQVALAIPDE DNCITIYCST QIPEVTQNVV
0801: AKCLGIPFHN VRLITRRVGG GFGGKAMKAI HVACACAVAA FKLQRPVRMY LDRKTDMIMA GGRHPMKVKY SVGFKSDGKI TALHIDLGIN AGISPDVSPM
0901: MPLAIIGSLK KYNWGNLAFD TKVCKTNVSS KSAMRGPGDV QGSFIAEAII EHVASALSVD TNTIRRKNLH DFESLVVFYG DTAGEASTYS LVTMFDKLAS
1001: SPEYQRRAEM VEHFNRSNKW KKRGISCVPI TYEVRLRPTP GKVSIMNDGS IAVEVGGVEI GQGLWTKVQQ MTAFGLGELC PDGGESLLDK VRVIQADTLS
1101: MIQGGFTGGS TTSETSCEAV RQSCVALVER LKPIKENLEA KAGTVEWSAL IAQASMASVN LSAHAYWTPD PTFTSYLNYG AGISEVEIDV LTGATTILRS
1201: DLVYDCGQSL NPAVDLGQVE GAFIQGVGFF TNEDYATNSD GLVIHDGTWT YKIPTVDTIP KQFNVELINS AHDQKRVLSS KASGEPPLLL ASSVHCAMRE
1301: AIRAARKEFS VCTGPANSTI TFQMDVPATM PIIKELCGLD VVERYLESMS AASPTATAQA
Best Arabidopsis Sequence Match ( AT3G43600.1 )
(BLAST)
0001: MSLVFAINGQ RFELELSSVD PSTTLLEFLR YQTSFKSVKL SCGEGGCGAC VVLLSKFDPV LQKVEDFTVS SCLTLLCSVN HCNITTSEGL GNSRDGFHPI
0101: HKRLSGFHAS QCGFCTPGMS VSLFSALLDA DKSQYSDLTV VEAEKAVSGN LCRCTGYRPI VDACKSFASD VDIEDLGLNS FCRKGDKDSS SLTRFDSEKR
0201: ICTFPEFLKD EIKSVDSGMY RWCSPASVEE LSSLLEACKA NSNTVSMKLV AGNTSMGYYK DEREQNYDKY IDITRIPHLK EIRENQNGVE IGSVVTISKV
0301: IAALKEIRVS PGVEKIFGKL ATHMEMIAAR FIRNFGSIGG NLVMAQRKQF PSDMATILLA AGAFVNIMSS SRGLEKLTLE EFLERSPLEA HDLVLSIEIP
0401: FWHSETNSEL FFETYRAAPR PHGSALAYLN AAFLAEVKDT MVVNCRLAFG AYGTKHAIRC KEIEEFLSGK VITDKVLYEA ITLLGNVVVP EDGTSNPAYR
0501: SSLAPGFLFK FLHTLMTHPT TDKPSNGYHL DPPKPLPMLS SSQNVPINNE YNPVGQPVTK VGASLQASGE AVYVDDIPSP TNCLYGAFIY SKKPFARIKG
0601: IHFKDDLVPT GVVAVISRKD VPKGGKNIGM KIGLGSDQLF AEDFTTSVGE CIAFVVADTQ RHADAAVNLA VVEYETEDLE PPILSVEDAV KKSSLFDIIP
0701: FLYPQQVGDT SKGMAEADHQ ILSSEIRLGS QYVFYMETQT ALAVGDEDNC IVVYSSTQTP QYVQSSVAAC LGIPENNIRV ITRRVGGGFG GKSVKSMPVA
0801: TACALAAKKL QRPVRTYVNR KTDMIMTGGR HPMKITYSVG FKSTGKITAL ELEILIDAGA SYGFSMFIPS NLIGSLKKYN WGALSFDIKL CKTNLLSRAI
0901: MRSPGDVQGT YIAEAIIENI ASSLSLEVDT IRKINLHTHE SLALFYKDGA GEPHEYTLSS MWDKVGVSSK FEERVSVVRE FNESNMWRKR GISRVPIIYE
1001: VLLFATPGRV SVLSDGTIVV EIGGIELGQG LWTKVKQMTS YALGMLQCDG TEELLEKIRV IQSDSLSMVQ GNFTGGSTTS EGSCAAVRLC CETLVERLKP
1101: LMERSDGPIT WNELISQAYA QSVNLSASDL YTPKDTPMQY LNYGTAVSEV EVDLVTGQTT VLQTDILYDC GKSLNPAVDL GQIEGSFVQG LGFFMLEEYI
1201: EDPEGLLLTD STWTYKIPTV DTIPKQFNVE ILNGGCHEKR VLSSKASGEP PLLLAASVHC ATRQAVKEAR KQLCMWKGEN GSSGSAFQLP VPATMPVVKE
1301: LCGLDIIESY LEWKLHDNSN L
Arabidopsis Description
AAO2Indole-3-acetaldehyde oxidase [Source:UniProtKB/Swiss-Prot;Acc:Q7G192]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.