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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • peroxisome 1
  • plastid 1
  • mitochondrion 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d029626_P005 Maize cytosol 96.72 96.79
TraesCS6B01G118400.1 Wheat mitochondrion 23.12 91.35
TraesCS1D01G192900.1 Wheat cytosol 85.56 85.68
TraesCS1A01G183800.1 Wheat cytosol 85.56 85.68
TraesCS1B01G205300.1 Wheat cytosol 85.41 85.54
HORVU1Hr1G049690.1 Barley cytosol 85.34 85.46
Os03t0429800-01 Rice cytosol 84.54 84.66
TraesCS6D01G078500.1 Wheat cytosol 84.25 84.18
TraesCS6B01G118300.1 Wheat peroxisome 47.85 78.85
GSMUA_Achr6P24950_001 Banana cytosol 68.2 75.53
VIT_06s0004g02030.t01 Wine grape cytosol 71.04 71.15
KRH23139 Soybean cytosol 70.17 70.84
KRH10197 Soybean cytosol 66.23 70.22
Solyc11g065920.1.1 Tomato cytosol, extracellular, unclear 69.44 69.69
CDX69096 Canola cytosol 68.49 69.4
AT4G34890.1 Thale cress cytosol 68.85 69.36
CDY22032 Canola cytosol 68.49 69.35
CDX75472 Canola cytosol 68.56 69.27
Bra011570.1-P Field mustard cytosol 68.49 69.2
CDY65337 Canola cytosol 67.69 68.54
AT4G34900.1 Thale cress cytosol 67.47 68.37
Bra036289.1-P Field mustard cytosol 66.89 67.68
Solyc11g065930.1.1 Tomato cytosol, unclear 64.11 64.78
EER90758 Sorghum peroxisome 31.58 31.65
EER90757 Sorghum cytosol, mitochondrion, peroxisome, plastid 30.93 31.18
EER90760 Sorghum peroxisome 30.78 30.92
KXG34906 Sorghum plastid 30.42 30.59
OQU88862 Sorghum cytosol, endoplasmic reticulum, peroxisome 29.69 30.42
OQU88864 Sorghum peroxisome 28.81 30.08
KXG34909 Sorghum mitochondrion, plastid 29.61 29.53
EER98027 Sorghum plastid 29.91 29.1
Protein Annotations
MapMan:10.1.2InterPro:2Fe-2S-bdInterPro:2Fe-2S-bd_dom_sfInterPro:2Fe-2S_ferredoxin-like_sfInterPro:2Fe-2S_ferredoxin-typeInterPro:2Fe2S_fd_BS
Gene3D:3.30.365.10MapMan:6.1.4.5UniProt:A0A1Z5S8Q5InterPro:AldOxase/xan_DH_Mopterin-bdInterPro:AldOxase/xan_DH_Mopterin-bd_sfInterPro:Ald_Oxase/Xan_DH_a/b
InterPro:Ald_Oxase/Xan_DH_a/b_sfInterPro:Ald_Oxase/xanthine_DHInterPro:CO_DH_flav_CInterPro:CO_DH_flav_C_dom_sfInterPro:FAD-bd_2InterPro:FAD-bd_2-like_sf
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0006091
GO:GO:0008150GO:GO:0008152GO:GO:0009055GO:GO:0009987GO:GO:0016491GO:GO:0016614
GO:GO:0022900GO:GO:0046872GO:GO:0050660GO:GO:0051536GO:GO:0051537GO:GO:0055114
GO:GO:0071949InterPro:IPR001041InterPro:IPR016166InterPro:Mopterin_DH_FAD-bdEnsemblPlants:OQU92302ProteinID:OQU92302
ProteinID:OQU92302.1ProteinID:OQU92303.1PFAM:PF00111PFAM:PF00941PFAM:PF01315PFAM:PF01799
PFAM:PF02738PFAM:PF03450PIRSF:PIRSF000127ScanProsite:PS00197PFscan:PS51085PFscan:PS51387
PANTHER:PTHR11908PANTHER:PTHR11908:SF100SMART:SM01008SMART:SM01092EnsemblPlantsGene:SORBI_3001G325200SUPFAM:SSF47741
SUPFAM:SSF54292SUPFAM:SSF54665SUPFAM:SSF55447SUPFAM:SSF56003SUPFAM:SSF56176UniParc:UPI0001C80AA9
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr1:+:61234635..61247817
Molecular Weight (calculated)
150276.0 Da
IEP (calculated)
6.651
GRAVY (calculated)
-0.085
Length
1371 amino acids
Sequence
(BLAST)
0001: MGSLTRAAEE DPAAAAEEEW SDEAVIYVNG VRRVLPDGLA HLTLLQYLRD IGLRGTKLGC GEGGCGACTV MVSCYDRITK KSLHFAINAC LAPLYSVEGM
0101: HIITVEGIGD RQRGLHPVQE CLAKAHGSQC GFCTPGFVMS MYALLRSSKQ PPTEDQIEDC LAGNLCRCTG YRPIIDAFRV FAKTDNLAYT NSSSENTNDQ
0201: AICPSTGKPC SCRNETDINV NESSLPSSVE RYSPYSYNEI DGSAYNEREL IFPPELQLRK VMPLKLNGFN EIKWYRPLKL KQLLHLKSCY LDAKLIIGNS
0301: EVGVETKFKN AQYNVMISVT HIPELNTLKV KEDGIHIGSA VRLAQLQNFL KKIIAERDLP ETSSCQAIVR QLKWFAGTQI RNVASVGGNI CTASPISDLN
0401: PLWIAVGAKF QIIDVNSNVR TILAKDFFLG YRKVDIKPEE ILLSIILPWT RPFEYVKEFK QAHRREDDIA LVNAGMRVYL QEAEGNWIIS DVSIVFGGVA
0501: AVPLSASRTE NFLTGKKLDS GLLDDTFNLL KEDISLSENA PGGMIEFRRS LTLSFFFKFF LSVTHEMKVK GLLEDGLHAD HLSAVQPYSR PVTVGTQSYE
0601: LVRQGTSVGQ PMVHMSAMLQ VTGEAEYTDD TPTPPNTLHA ALVLSKKAHA RILSIDDSLA KSSPGFAGLF LSKDIPGVNH TGPVIHDEEF FASDIVTCVG
0701: QIIGIVVADT HDNAKTAANK VHIEYCELPA ILSIEEAVKN GSFHPNTKKC LVKGDVEQCF LSGACDRIVS GQVHVGGQEH FYMEPQCTLV WPVDSGNEIH
0801: MVSSTQAPQK HQKYVASVLG LPQSKVVCKT KRIGGGFGGK ETRSAIFAAA ASVPSFCLRR PVKLVLDRDV DMISSGQRHS FLGKYKVGFT NEGKILALDL
0901: EIYNNGGHSL DLSLAVLERA MFHSENVYDI ANIRINGQVC FTNFPSNTAF RGFGGPQGLL IAENWIHHIA TELQRSPEEI KELNFHNDGV VLHYGQLLQN
1001: CTIGSVWDEL KSSCNFVEAR KAVNSFNSNS RWRKRGIAMI PTKFGISFTA KFMNQAGALV QVYTDGTVLV THGGVEMGQG LHTKIAQVAA SSFNIPLSSV
1101: FISETSTDKV PNASPTAASA SSDLYGAAVL DACQQIKVRM EPIASKGTHN SFAELAQACY MERVDLSAHG FYATPNIGFD WTIGKGTPFN YFTYGAAFAE
1201: VEIDTLTGDF YTRTADIVMD LGFSINPAID IGQIEGAFVQ GLGWAAMEEL KWGDDNHKWI RPGHLFTCGP GSYKIPSVND IPLNFKVSLL KGVPNPKAIH
1301: SSKAVGEPPF FLGSAVLFAI KDAIFAARAE EGHLEWFPLD NPATPERIRM ACVDSITKKF AGIDYRPKLS V
Best Arabidopsis Sequence Match ( AT4G34890.1 )
(BLAST)
0001: MGSLKKDGEI GDEFTEALLY VNGVRRVLPD GLAHMTLLEY LRDLGLTGTK LGCGEGGCGA CTVMVSSYDR KSKTSVHYAV NACLAPLYSV EGMHVISIEG
0101: LGHRKLGLHP VQESLASSHG SQCGFCTPGF IMSMYSLLRS SKNSPSEEEI EECLAGNLCR CTGYRPIVDA FRVFAKSDDA LYCGVSSLSL QDGSTICPST
0201: GKPCSCGSKT TNEVASCNED RFQSISYSDI DGAKYTDKEL IFPPELLLRK LTPLKLRGNG GITWYRPVCL QNLLELKANY PDAKLLVGNT EVGIEMRLKR
0301: LQYQVLISVA QVPELNALNV NDNGIEVGSA LRLSELLRLF RKIVKERPAH ETSACKAFIE QLKWFAGTQI RNVACIGGNI CTASPISDLN PLWMASRAEF
0401: RITNCNGDVR SIPAKDFFLG YRKVDMGSNE ILLSVFLPWT RPLEYVKEFK QAHRRDDDIA IVNGGMRVFL EDKGQQLFVS DASIAYGGVA PLSLCARKTE
0501: EFLIGKNWNK DLLQDALKVI QSDVVIKEDA PGGMVEFRKS LTLSFFFKFF LWVSHNVNNA NSAIETFPPS HMSAVQPVPR LSRIGKQDYE TVKQGTSVGS
0601: SEVHLSARMQ VTGEAEYTDD TPVPPNTLHA AFVLSKVPHA RILSIDDSAA KSSSGFVGLF LAKDIPGDNM IGPIVPDEEL FATDVVTCVG QVIGVVVADT
0701: HENAKTAAGK VDVRYEELPA ILSIKEAINA KSFHPNTEKR LRKGDVELCF QSGQCDRVIE GEVQMGGQEH FYLEPNGSLV WTVDGGSEVH MISSTQAPQK
0801: HQKYVSHVLG LPMSKVVCKT KRIGGGFGGK ETRSAFIAAA ASVPSYLLNR PVKLILDRDV DMMITGHRHS FLGKYKVGFT NEGKILALDL EIYNNGGNSL
0901: DLSLSVLERA MFHSDNVYEI PHVRIVGNVC FTNFPSNTAF RGFGGPQGML ITENWIQRIA AELNKSPEEI KEMNFQVEGS VTHYCQTLQH CTLHQLWKEL
1001: KVSCNFLKAR READEFNSHN RWKKRGVAMV PTKFGISFTT KFMNQAGALV HVYTDGTVLV THGGVEMGQG LHTKVAQVAA SAFNIPLSSV FVSETSTDKV
1101: PNASPTAASA SSDMYGAAVL DACEQIIARM EPVASKHNFN TFTELVSACY FQRIDLSAHG FHIVPDLGFD WISGKGNAFR YYTYGAAFAE VEIDTLTGDF
1201: HTRAADIMLD LGYSLNPAID VGQIEGAFVQ GLGWVALEEL KWGDAAHKWI KPGSLLTCGP GNYKIPSIND MPFNLNVSLL KGNPNTKAIH SSKAVGEPPF
1301: FLASSVFFAI KEAIKAARTE VGLTDWFPLE SPATPERIRM ACFDEFSAPF VNSDFYPNLS V
Arabidopsis Description
XDH1Xanthine dehydrogenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUQ8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.