CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
plastid 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10197	Soybean	cytosol	91.24	95.82
TraesCS6B01G118400.1	Wheat	mitochondrion	20.32	79.54
VIT_06s0004g02030.t01	Wine grape	cytosol	78.72	78.09
CDX69096	Canola	cytosol	77.1	77.38
Bra011570.1-P	Field mustard	cytosol	76.73	76.79
CDX75472	Canola	cytosol	76.73	76.79
AT4G34890.1	Thale cress	cytosol	76.88	76.71
Solyc11g065920.1.1	Tomato	cytosol, extracellular, unclear	77.1	76.65
CDY22032	Canola	cytosol	75.41	75.63
CDY65337	Canola	cytosol	75.18	75.41
AT4G34900.1	Thale cress	cytosol	74.82	75.09
Bra036289.1-P	Field mustard	cytosol	73.56	73.73
GSMUA_Achr6P24950_001	Banana	cytosol	66.57	73.02
Solyc11g065930.1.1	Tomato	cytosol, unclear	71.13	71.19
OQU92302	Sorghum	cytosol	70.84	70.17
Zm00001d029626_P005	Maize	cytosol	70.69	70.07
Os03t0429800-01	Rice	cytosol	70.32	69.76
TraesCS1B01G205300.1	Wheat	cytosol	70.32	69.76
TraesCS1A01G183800.1	Wheat	cytosol	70.18	69.61
TraesCS1D01G192900.1	Wheat	cytosol	70.18	69.61
HORVU1Hr1G049690.1	Barley	cytosol	70.1	69.54
TraesCS6D01G078500.1	Wheat	cytosol	69.37	68.66
TraesCS6B01G118300.1	Wheat	peroxisome	38.66	63.1
KRH73425	Soybean	cytosol	30.93	30.72
KRH73423	Soybean	cytosol	30.12	29.96
KRH14734	Soybean	cytosol, endoplasmic reticulum, peroxisome	30.19	29.93
KRH73424	Soybean	cytosol, mitochondrion, peroxisome, plastid	7.73	28.77

Protein Annotations

MapMan:10.1.2	EntrezGene:100800309	InterPro:2Fe-2S-bd	InterPro:2Fe-2S-bd_dom_sf	InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type
InterPro:2Fe2S_fd_BS	Gene3D:3.30.365.10	MapMan:6.1.4.5	EMBL:ACUP02008457	InterPro:AldOxase/xan_DH_Mopterin-bd	InterPro:AldOxase/xan_DH_Mopterin-bd_sf
InterPro:Ald_Oxase/Xan_DH_a/b	InterPro:Ald_Oxase/Xan_DH_a/b_sf	InterPro:Ald_Oxase/xanthine_DH	InterPro:CO_DH_flav_C	InterPro:CO_DH_flav_C_dom_sf	InterPro:FAD-bd_2
InterPro:FAD-bd_2-like_sf	EnsemblPlantsGene:GLYMA_13G340300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004854
GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006091	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009056	GO:GO:0009115	GO:GO:0009987	GO:GO:0016491	GO:GO:0016614	GO:GO:0016903
GO:GO:0022900	GO:GO:0046872	GO:GO:0050660	GO:GO:0051536	GO:GO:0051537	GO:GO:0055114
GO:GO:0071949	UniProt:I1M510	InterPro:IPR001041	InterPro:IPR016166	EnsemblPlants:KRH23139	ProteinID:KRH23139
ProteinID:KRH23139.1	InterPro:Mopterin_DH_FAD-bd	PFAM:PF00111	PFAM:PF00941	PFAM:PF01315	PFAM:PF01799
PFAM:PF02738	PFAM:PF03450	PIRSF:PIRSF000127	ScanProsite:PS00197	PFscan:PS51085	PFscan:PS51387
PANTHER:PTHR11908	PANTHER:PTHR11908:SF100	SMART:SM01008	SMART:SM01092	SUPFAM:SSF47741	SUPFAM:SSF54292
SUPFAM:SSF54665	SUPFAM:SSF55447	SUPFAM:SSF56003	SUPFAM:SSF56176	UniParc:UPI000233AF71	SEG:seg

Description

hypothetical protein

Coordinates

chr13:+:43228966..43240216

Molecular Weight (calculated)

149305.0 Da

IEP (calculated)

6.827

GRAVY (calculated)

-0.072

Length

1358 amino acids

Sequence
(BLAST)

0001: MGSLKTEEDL KVSNEAILYV NGVRRLLSDG LAHFTLLEYL RDIGLTGTKL GCGEGGCGAC TVMVSQYDRI LKKCSHYAIN ACLAPLYSVE GMHVITVEGL
0101: GSCKRGLHPV QESLARAHGS QCGFCTPGFV MSMYALLRSS QTPPSEEQIE ECLAGNLCRC TGYRPIFDAF RVFAKTSNDL YTGVSSLSLE EGKSVCPSTG
0201: KPCSCNLSNT NDKCVGGDNG YEPTSYNEID GTKYTERELI FPPELLLRTP TSLNLTGFGG LMWYRPLTLQ HVLDLKAKYT DAKLLVGNTE VGIEMRLKRM
0301: PYRVLISVMH VPELNVLGAK DDGLEIGAAV RLSDLMNFFK KVVTERAAHE TLSCKAFIEQ LKWFAGTQIR NAASVGGNIC TASPISDLNP LWMAARAKFR
0401: IIDAKGNIRT VLAENFFLPG YRKVNLASGE ILLSVFLPWN RTFEFVKEFK QSHRRDDDIA IVNAGIRVHL QEHSENCVVA DASIFYGGVA PYSLAATKTK
0501: EFLIGKNWNQ DLLQNALKVL QKDILLKEDA PGGMVEFRKS LTLSFFFKFF LWVSHQMDSV KESIPSSHLS AVHSVHRPPV TGSQDYEIRK RGTSVGSPEV
0601: HLSARLQVTG EAEYADDTPM PPNGLHAALV LSKKPHARII KIDDSEAISS PGFVSLFLAK DVPSDNKIGP VVADEDLFAV DYVTCVGQVI GVVVADTHEN
0701: AKIAARKVIV EYEELPAILS IRDAINARSF HPNTEKCLSK GDVDHCFQSG QCDRIIEGEV QMGGQEHFYL EPHSTLIWTV DGGNEVHMIS SSQAPQKHQK
0801: YVSHVLGLPM SKVVCKTKRI GGGFGGKETR SAFIAAAASV PSYLLNRPVK ITLDRDVDMM ITGQRHSFLG KYKVGFTNEG RVLALDLEIY NNAGNSLDLS
0901: LAILERAMFH SDNVYEIPNM RVMGRACFTN FPSHTAFRGF GGPQGLLIAE NWIQRIAVEL KMSPEKIREI NFQGEGSILH YGQIVQYSTL APLWNELKLS
1001: CDFAKARKEV DEFNSHNRWR KRGIAMIPNK FGISFTTKLM NQAGALVQVY TDGTVLVTHG GVEMGQGLHT KVAQIAASAF HIPLSSVFIS DTSTDKVPNA
1101: SPTAASASSD MYGAAVLDAC EQIMERMEPI ASKHNFNSFA ELVGACYAER IDLSAHGFYI TPDIGFDWTI GKGKPFRYFT YGAAFAEVEI DTLTGDFHTR
1201: VANIFLDLGY SLNPAIDVGQ IEGAFIQGLG WVALEELKWG DEAHKWIPSG CLYTCGPGAY KIPSVNDVPF KFNVSLLKGH PNVKAIHSSK AVGEPPFFLA
1301: SAVLFAIKDA IIAARSEMGH NEWFPLDSPA TPERIRMACL DELLSSFVNS DFHPKLSV

Best Arabidopsis Sequence Match ( AT4G34890.1 )
(BLAST)

0001: MGSLKKDGEI GDEFTEALLY VNGVRRVLPD GLAHMTLLEY LRDLGLTGTK LGCGEGGCGA CTVMVSSYDR KSKTSVHYAV NACLAPLYSV EGMHVISIEG
0101: LGHRKLGLHP VQESLASSHG SQCGFCTPGF IMSMYSLLRS SKNSPSEEEI EECLAGNLCR CTGYRPIVDA FRVFAKSDDA LYCGVSSLSL QDGSTICPST
0201: GKPCSCGSKT TNEVASCNED RFQSISYSDI DGAKYTDKEL IFPPELLLRK LTPLKLRGNG GITWYRPVCL QNLLELKANY PDAKLLVGNT EVGIEMRLKR
0301: LQYQVLISVA QVPELNALNV NDNGIEVGSA LRLSELLRLF RKIVKERPAH ETSACKAFIE QLKWFAGTQI RNVACIGGNI CTASPISDLN PLWMASRAEF
0401: RITNCNGDVR SIPAKDFFLG YRKVDMGSNE ILLSVFLPWT RPLEYVKEFK QAHRRDDDIA IVNGGMRVFL EDKGQQLFVS DASIAYGGVA PLSLCARKTE
0501: EFLIGKNWNK DLLQDALKVI QSDVVIKEDA PGGMVEFRKS LTLSFFFKFF LWVSHNVNNA NSAIETFPPS HMSAVQPVPR LSRIGKQDYE TVKQGTSVGS
0601: SEVHLSARMQ VTGEAEYTDD TPVPPNTLHA AFVLSKVPHA RILSIDDSAA KSSSGFVGLF LAKDIPGDNM IGPIVPDEEL FATDVVTCVG QVIGVVVADT
0701: HENAKTAAGK VDVRYEELPA ILSIKEAINA KSFHPNTEKR LRKGDVELCF QSGQCDRVIE GEVQMGGQEH FYLEPNGSLV WTVDGGSEVH MISSTQAPQK
0801: HQKYVSHVLG LPMSKVVCKT KRIGGGFGGK ETRSAFIAAA ASVPSYLLNR PVKLILDRDV DMMITGHRHS FLGKYKVGFT NEGKILALDL EIYNNGGNSL
0901: DLSLSVLERA MFHSDNVYEI PHVRIVGNVC FTNFPSNTAF RGFGGPQGML ITENWIQRIA AELNKSPEEI KEMNFQVEGS VTHYCQTLQH CTLHQLWKEL
1001: KVSCNFLKAR READEFNSHN RWKKRGVAMV PTKFGISFTT KFMNQAGALV HVYTDGTVLV THGGVEMGQG LHTKVAQVAA SAFNIPLSSV FVSETSTDKV
1101: PNASPTAASA SSDMYGAAVL DACEQIIARM EPVASKHNFN TFTELVSACY FQRIDLSAHG FHIVPDLGFD WISGKGNAFR YYTYGAAFAE VEIDTLTGDF
1201: HTRAADIMLD LGYSLNPAID VGQIEGAFVQ GLGWVALEEL KWGDAAHKWI KPGSLLTCGP GNYKIPSIND MPFNLNVSLL KGNPNTKAIH SSKAVGEPPF
1301: FLASSVFFAI KEAIKAARTE VGLTDWFPLE SPATPERIRM ACFDEFSAPF VNSDFYPNLS V

Arabidopsis Description

XDH1Xanthine dehydrogenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUQ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.