Factsheet for Bra036289.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
EpiLoc:	peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22032	Canola	cytosol	96.16	96.23
Bra011570.1-P	Field mustard	cytosol	83.17	83.05
KRH10197	Soybean	cytosol	70.77	74.17
TraesCS6B01G118400.1	Wheat	mitochondrion	18.97	74.06
KRH23139	Soybean	cytosol	73.73	73.56
VIT_06s0004g02030.t01	Wine grape	cytosol	73.36	72.61
Solyc11g065920.1.1	Tomato	cytosol, extracellular, unclear	71.0	70.42
GSMUA_Achr6P24950_001	Banana	cytosol	63.39	69.39
Os03t0429800-01	Rice	cytosol	68.12	67.42
HORVU1Hr1G049690.1	Barley	cytosol	67.68	66.98
OQU92302	Sorghum	cytosol	67.68	66.89
TraesCS1A01G183800.1	Wheat	cytosol	67.53	66.84
TraesCS1D01G192900.1	Wheat	cytosol	67.45	66.76
TraesCS1B01G205300.1	Wheat	cytosol	67.38	66.69
Zm00001d029626_P005	Maize	cytosol	67.38	66.64
TraesCS6D01G078500.1	Wheat	cytosol	67.08	66.25
Solyc11g065930.1.1	Tomato	cytosol, unclear	66.2	66.1
TraesCS6B01G118300.1	Wheat	peroxisome	37.86	61.66
Bra034975.1-P	Field mustard	cytosol	28.86	31.43
Bra019448.1-P	Field mustard	cytosol, peroxisome, plastid	29.15	30.41
Bra002347.1-P	Field mustard	cytosol	30.18	29.99
Bra034325.1-P	Field mustard	cytosol	20.07	29.63
Bra015330.1-P	Field mustard	cytosol, peroxisome, plastid	29.23	29.57
Bra020140.1-P	Field mustard	cytosol	29.15	29.32
Bra034974.1-P	Field mustard	cytosol	5.46	26.43

Protein Annotations

MapMan:10.1.2	InterPro:2Fe-2S-bd	InterPro:2Fe-2S-bd_dom_sf	InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	InterPro:2Fe2S_fd_BS
Gene3D:3.30.365.10	MapMan:6.1.4.5	InterPro:AldOxase/xan_DH_Mopterin-bd	InterPro:AldOxase/xan_DH_Mopterin-bd_sf	InterPro:Ald_Oxase/Xan_DH_a/b	InterPro:Ald_Oxase/Xan_DH_a/b_sf
InterPro:Ald_Oxase/xanthine_DH	EnsemblPlantsGene:Bra036289	EnsemblPlants:Bra036289.1	EnsemblPlants:Bra036289.1-P	InterPro:CO_DH_flav_C	InterPro:CO_DH_flav_C_dom_sf
InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005506	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0016491	GO:GO:0016614	GO:GO:0022900	GO:GO:0046872	GO:GO:0050660	GO:GO:0051536
GO:GO:0051537	GO:GO:0055114	GO:GO:0071949	InterPro:IPR001041	InterPro:IPR016166	UniProt:M4F5D3
InterPro:Mopterin_DH_FAD-bd	PFAM:PF00111	PFAM:PF00941	PFAM:PF01315	PFAM:PF01799	PFAM:PF02738
PFAM:PF03450	PIRSF:PIRSF000127	ScanProsite:PS00197	PFscan:PS51085	PFscan:PS51387	PANTHER:PTHR11908
PANTHER:PTHR11908:SF100	SMART:SM01008	SMART:SM01092	SUPFAM:SSF47741	SUPFAM:SSF54292	SUPFAM:SSF54665
SUPFAM:SSF55447	SUPFAM:SSF56003	SUPFAM:SSF56176	UniParc:UPI0002541FFD	SEG:seg	:

Description

AT4G34890 (E=0.0) ATXDH1, XDH1 | XDH1 (XANTHINE DEHYDROGENASE 1); xanthine dehydrogenase

Coordinates

chrA09:-:343094..348662

Molecular Weight (calculated)

148946.0 Da

IEP (calculated)

6.588

GRAVY (calculated)

-0.095

Length

1355 amino acids

Sequence
(BLAST)

0001: MEQIGDEFTE AILYVNGVRR VLPDGLAHMT LLEYLRDLGL TGTKLGCGEG GCGACTVMVS NYDRTSNKCI HYAVNACLAP LYSVEGMHVI SIEGVGHRKH
0101: GLHPLQESLA SSHGSQCGFC TPGFVMSMYA LLRSNKTPPS EEEIEESLAG NLCRCTGYRP IVDAFRVFAK TNDALYSGLS SLSLQDGSSI CPSTGKPCSC
0201: GDGRFQPISY SDTDGAKYTE KELIFPPELL LRKLAPLKLR GDGGMIWYRP VRLQYLLHLK AKHPEAKLLV GNTEVGIEMR LKRLQYQVLI CVGQVPELNT
0301: VNVNDNGVEI GSALRLSELL KLFRKVVKER PAHETSACKA FIEQLKWFAG TQIRNVASVG GNICTASPIS DLNPLWMASR AEFKIINCYG DVRSVRARDF
0401: FSGYRKVDME SNEILLSVLI PWTRPLEYVK EFKQAHRRED DIAIVNGGMR VFLEERGGEL FVSEAIVAFG GVAPVTLRAR KTEEFLIGKS WSKGLLQDAL
0501: KVIQSDVLID EDAPGGMVEF RKSLVLSFFF KFFLWVTHHL RDVKQALETF PPSYTSAVQS FARPCRAGRQ DYETVRQGTA VGLPEVHLSA RMQVTGEAEY
0601: TDDTPVPPNT LHAALVLSKM PHARIISIDD SESKSSPGFA GLFLAKDVPA DNKIGPVVAD EELFATDGVT CVGQVIGVVV ADTHENAKAA AGKVEVEYEE
0701: LPAILSIREA IAAKSFHPNT EKMLKKGDVE ICFQSGQCDR IIEGEVQMGS QEHFYMEPHG SLVWTSDGGN EVHMISSTQD PHRHQLYVSH VLGLPMSKVV
0801: CKTKRIGGGF GGKETRSAFI AAAASVPSYL LNRPVKLILD RDVDMMISGH RHSFVGKYKV GFTNEGKVLA YDLEIYNNGG NSLDLSQAVL EIAMFNSDNV
0901: YDIPHVRIRG NVCFTNYPSN TAFRGFGGPQ GMLITENWIH RIAAELDRSP EEIREMTFQV EGSITHYSQC IQHCPLHQLW KEPKVSCNFL KARTEVDEFN
1001: SHNRWKKRGV AMVPTKFGVS FTKTFMNQAG ALVHVYTDGT VLVTHGGVEM GQGLHTKVAQ VAASAFNIPL SSVFVSETST DKVPNASPTA ASMSSDMYGA
1101: AVLDACEQIK ARMEPVGSKL SFNSFAELAS ACYFQRIDLS AHGFYIVPDV GFDWISGKGD PFRYYTYGAA FAEVEIDTLT GDFHTRTVDI KLDLGYSLNP
1201: AIDIGQVLET KPLEIIKTRV LRLCLKPEHV LQIEGAFVQG ESTHLGNLLT CGPGNYKIPS INDIPFNFTV SLLKGNPNSK GIHSSKAVGE PPFFLASSVL
1301: FAIKDAVKAA RAEVGLGSGW FPLDTPATPE RIRMACFDEF TCPFVSSDFC PELSV

Best Arabidopsis Sequence Match ( AT4G34890.1 )
(BLAST)

0001: MGSLKKDGEI GDEFTEALLY VNGVRRVLPD GLAHMTLLEY LRDLGLTGTK LGCGEGGCGA CTVMVSSYDR KSKTSVHYAV NACLAPLYSV EGMHVISIEG
0101: LGHRKLGLHP VQESLASSHG SQCGFCTPGF IMSMYSLLRS SKNSPSEEEI EECLAGNLCR CTGYRPIVDA FRVFAKSDDA LYCGVSSLSL QDGSTICPST
0201: GKPCSCGSKT TNEVASCNED RFQSISYSDI DGAKYTDKEL IFPPELLLRK LTPLKLRGNG GITWYRPVCL QNLLELKANY PDAKLLVGNT EVGIEMRLKR
0301: LQYQVLISVA QVPELNALNV NDNGIEVGSA LRLSELLRLF RKIVKERPAH ETSACKAFIE QLKWFAGTQI RNVACIGGNI CTASPISDLN PLWMASRAEF
0401: RITNCNGDVR SIPAKDFFLG YRKVDMGSNE ILLSVFLPWT RPLEYVKEFK QAHRRDDDIA IVNGGMRVFL EDKGQQLFVS DASIAYGGVA PLSLCARKTE
0501: EFLIGKNWNK DLLQDALKVI QSDVVIKEDA PGGMVEFRKS LTLSFFFKFF LWVSHNVNNA NSAIETFPPS HMSAVQPVPR LSRIGKQDYE TVKQGTSVGS
0601: SEVHLSARMQ VTGEAEYTDD TPVPPNTLHA AFVLSKVPHA RILSIDDSAA KSSSGFVGLF LAKDIPGDNM IGPIVPDEEL FATDVVTCVG QVIGVVVADT
0701: HENAKTAAGK VDVRYEELPA ILSIKEAINA KSFHPNTEKR LRKGDVELCF QSGQCDRVIE GEVQMGGQEH FYLEPNGSLV WTVDGGSEVH MISSTQAPQK
0801: HQKYVSHVLG LPMSKVVCKT KRIGGGFGGK ETRSAFIAAA ASVPSYLLNR PVKLILDRDV DMMITGHRHS FLGKYKVGFT NEGKILALDL EIYNNGGNSL
0901: DLSLSVLERA MFHSDNVYEI PHVRIVGNVC FTNFPSNTAF RGFGGPQGML ITENWIQRIA AELNKSPEEI KEMNFQVEGS VTHYCQTLQH CTLHQLWKEL
1001: KVSCNFLKAR READEFNSHN RWKKRGVAMV PTKFGISFTT KFMNQAGALV HVYTDGTVLV THGGVEMGQG LHTKVAQVAA SAFNIPLSSV FVSETSTDKV
1101: PNASPTAASA SSDMYGAAVL DACEQIIARM EPVASKHNFN TFTELVSACY FQRIDLSAHG FHIVPDLGFD WISGKGNAFR YYTYGAAFAE VEIDTLTGDF
1201: HTRAADIMLD LGYSLNPAID VGQIEGAFVQ GLGWVALEEL KWGDAAHKWI KPGSLLTCGP GNYKIPSIND MPFNLNVSLL KGNPNTKAIH SSKAVGEPPF
1301: FLASSVFFAI KEAIKAARTE VGLTDWFPLE SPATPERIRM ACFDEFSAPF VNSDFYPNLS V

Arabidopsis Description

XDH1Xanthine dehydrogenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUQ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.