Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G118400.1 | Wheat | mitochondrion | 20.23 | 79.83 |
| KRH23139 | Soybean | cytosol | 78.09 | 78.72 |
| Solyc11g065920.1.1 | Tomato | cytosol, extracellular, unclear | 78.23 | 78.4 |
| KRH10197 | Soybean | cytosol | 73.63 | 77.96 |
| CDX69096 | Canola | cytosol | 76.63 | 77.53 |
| CDX75472 | Canola | cytosol | 76.63 | 77.3 |
| Bra011570.1-P | Field mustard | cytosol | 76.48 | 77.16 |
| AT4G34890.1 | Thale cress | cytosol | 76.26 | 76.71 |
| CDY22032 | Canola | cytosol | 74.43 | 75.26 |
| CDY65337 | Canola | cytosol | 74.36 | 75.18 |
| AT4G34900.1 | Thale cress | cytosol | 74.29 | 75.17 |
| GSMUA_Achr6P24950_001 | Banana | cytosol | 67.42 | 74.56 |
| Bra036289.1-P | Field mustard | cytosol | 72.61 | 73.36 |
| Solyc11g065930.1.1 | Tomato | cytosol, unclear | 71.66 | 72.29 |
| Os03t0429800-01 | Rice | cytosol | 71.37 | 71.37 |
| OQU92302 | Sorghum | cytosol | 71.15 | 71.04 |
| Zm00001d029626_P005 | Maize | cytosol | 70.71 | 70.66 |
| HORVU1Hr1G049690.1 | Barley | cytosol | 70.56 | 70.56 |
| TraesCS1B01G205300.1 | Wheat | cytosol | 70.49 | 70.49 |
| TraesCS1D01G192900.1 | Wheat | cytosol | 70.34 | 70.34 |
| TraesCS1A01G183800.1 | Wheat | cytosol | 70.34 | 70.34 |
| TraesCS6D01G078500.1 | Wheat | cytosol | 69.69 | 69.53 |
| TraesCS6B01G118300.1 | Wheat | peroxisome | 38.42 | 63.22 |
| VIT_18s0041g02400.t01 | Wine grape | cytosol | 5.48 | 36.76 |
| VIT_18s0041g02390.t01 | Wine grape | peroxisome | 18.7 | 32.28 |
| VIT_06s0009g00770.t01 | Wine grape | cytosol, nucleus, peroxisome | 30.68 | 30.77 |
| VIT_18s0041g02430.t01 | Wine grape | cytosol | 30.46 | 30.71 |
| VIT_18s0041g02410.t01 | Wine grape | cytosol | 29.22 | 30.17 |
Protein Annotations
| MapMan:10.1.2 | EntrezGene:100248547 | wikigene:100248547 | InterPro:2Fe-2S-bd | InterPro:2Fe-2S-bd_dom_sf | InterPro:2Fe-2S_ferredoxin-like_sf |
| InterPro:2Fe-2S_ferredoxin-type | InterPro:2Fe2S_fd_BS | Gene3D:3.30.365.10 | MapMan:6.1.4.5 | EMBL:AM431417 | InterPro:AldOxase/xan_DH_Mopterin-bd |
| InterPro:AldOxase/xan_DH_Mopterin-bd_sf | InterPro:Ald_Oxase/Xan_DH_a/b | InterPro:Ald_Oxase/Xan_DH_a/b_sf | InterPro:Ald_Oxase/xanthine_DH | ProteinID:CAN75890 | ProteinID:CAN75890.1 |
| ProteinID:CCB43714 | ProteinID:CCB43714.1 | InterPro:CO_DH_flav_C | InterPro:CO_DH_flav_C_dom_sf | ncoils:Coil | UniProt:F6GU50 |
| InterPro:FAD-bd_2 | InterPro:FAD-bd_2-like_sf | EMBL:FN594951 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004854 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006091 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009055 | GO:GO:0009056 | GO:GO:0009115 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0016614 |
| GO:GO:0016903 | GO:GO:0022900 | GO:GO:0046872 | GO:GO:0050660 | GO:GO:0051536 | GO:GO:0051537 |
| GO:GO:0055114 | GO:GO:0071949 | InterPro:IPR001041 | InterPro:IPR016166 | EntrezGene:LOC100248547 | wikigene:LOC100248547 |
| InterPro:Mopterin_DH_FAD-bd | PFAM:PF00111 | PFAM:PF00941 | PFAM:PF01315 | PFAM:PF01799 | PFAM:PF02738 |
| PFAM:PF03450 | PIRSF:PIRSF000127 | ScanProsite:PS00197 | PFscan:PS51085 | PFscan:PS51387 | PANTHER:PTHR11908 |
| PANTHER:PTHR11908:SF100 | SMART:SM01008 | SMART:SM01092 | SUPFAM:SSF47741 | SUPFAM:SSF54292 | SUPFAM:SSF54665 |
| SUPFAM:SSF55447 | SUPFAM:SSF56003 | SUPFAM:SSF56176 | TIGR:TC51801 | UniParc:UPI000198367A | ArrayExpress:VIT_06s0004g02030 |
| EnsemblPlantsGene:VIT_06s0004g02030 | EnsemblPlants:VIT_06s0004g02030.t01 | unigene:Vvi.6666 | RefSeq:XP_002285473 | RefSeq:XP_002285473.1 | RefSeq:XP_002285474 |
| RefSeq:XP_002285474.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6:-:2452767..2472179
Molecular Weight (calculated)
150717.0 Da
IEP (calculated)
6.814
GRAVY (calculated)
-0.103
Length
1369 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGSLKNEEEL EGVEEGSKEA ILYVNGVRKV LPDGLAHLTL LEYLRDIGLT GTKLGCGEGG CGACTVMVSY FDENSKKCVH YAVNACLAPL YSVEGMHVIT
0101: VEGIGNRRNG LHPIQESLAL SHGSQCGFCT PGFIMSMYAL LRSSQTPPSE EQIEESLAGN LCRCTGYRPI IDAFRVFAKT DDVLYTDRSS LSLQEGEFIC
0201: PSTGKPCSCK SGSSNDKDAA KSNMSCVDRY EPISYSEIQG STYTEKELIF PPELLLRKLT PLNMNGFGGL KWYRPLGLKH LLELKARYPD AKLVVGNSEV
0301: GIEMRLKRIQ HQVLISVINI PELTMLSVKD DGLEIGAAVR LSSLQNLLRK VLADRVAYET SACKAFIEQI KWFAGTQIKN VASVGGNICT ASPISDLNPL
0401: WMAAGAKFRV INCKGNIRTV LAENFFLGYR KVDLAHDEIL LSIFLPWTRP FEFVKEFKQA HRRDDDIAIV NAGMRVYLQE KEEKWVVSDA SIAYGGVAPL
0501: SLSASKTKDF LIGKIWNREL LQDALKILQK NILIKDDAPG GMVEFRKSLT LSFFFKFFLW VSHQMDGQRF FLETVPISHL SAVQPFHRPS VTGMQDYEVV
0601: KHGTAVGSPE IHLSSKLQVT GEAEYADDMP MPPNGLHAAL VLSRKPHARI LSIDDSGAKS SPGFAGIFFH KDVPGGNAIG PVVNDEEIFA SEFVTFVGQV
0701: IGVVVADTQE NAKLAARKVH VKYEELPAIL SIEDALKAKS FLPNTERHIE KGDVDLCFQS GCCDKILEGE VHVGGQEHFY LETNSSLVWT TDSGNEVHMI
0801: SSTQCPQKHQ KYVSHVLGLP MSKVVCKTKR IGGGFGGKET RSACFAAVAC VPSYLLNRPV KLTLDRDIDM MISGQRHTFL GKYKVGFTND GKVQALDLEI
0901: YNNGGNSLDL SGAVLERAMF HSDNVYDIPN VRINGKVCLT NFPSHTAFRG FGGPQGMLIT ENWIQRIATE LKKSPEEIRE INFQSEGCVT HYGQQLQHFT
1001: LPRVWNELKS SCEFLKARGE VDQFNLQNRW KKRGVAMVPT KFGISFTTKF MNQAGALVHV YTDGTVLVTH GGVEMGQGLH TKVAQVAASS FNIPLSSVFI
1101: SETSTDKVPN STPTAASASS DMYGAAVLDA CEQIKARMEP IASKRNFSSF AELVTACYLE RIDLSAHGFY ITPDIHFDWK TGKGSPFSYF TYGASFAEVE
1201: IDTLTGDFHT RVANVFLDLG HSINPAIDVG QIEGAFVQGL GWVALEELKW GDAAHKWIPP GCLYTCGPGS YKIPSINDVP LKFDVSLLKG APNPKAIHSS
1301: KAVGEPPFFL ASSVFFAIKD AIVAARREVG NKDWFPLDNP ATPERVRMAC LDEFAMQFVS SDFRPKLSV
0101: VEGIGNRRNG LHPIQESLAL SHGSQCGFCT PGFIMSMYAL LRSSQTPPSE EQIEESLAGN LCRCTGYRPI IDAFRVFAKT DDVLYTDRSS LSLQEGEFIC
0201: PSTGKPCSCK SGSSNDKDAA KSNMSCVDRY EPISYSEIQG STYTEKELIF PPELLLRKLT PLNMNGFGGL KWYRPLGLKH LLELKARYPD AKLVVGNSEV
0301: GIEMRLKRIQ HQVLISVINI PELTMLSVKD DGLEIGAAVR LSSLQNLLRK VLADRVAYET SACKAFIEQI KWFAGTQIKN VASVGGNICT ASPISDLNPL
0401: WMAAGAKFRV INCKGNIRTV LAENFFLGYR KVDLAHDEIL LSIFLPWTRP FEFVKEFKQA HRRDDDIAIV NAGMRVYLQE KEEKWVVSDA SIAYGGVAPL
0501: SLSASKTKDF LIGKIWNREL LQDALKILQK NILIKDDAPG GMVEFRKSLT LSFFFKFFLW VSHQMDGQRF FLETVPISHL SAVQPFHRPS VTGMQDYEVV
0601: KHGTAVGSPE IHLSSKLQVT GEAEYADDMP MPPNGLHAAL VLSRKPHARI LSIDDSGAKS SPGFAGIFFH KDVPGGNAIG PVVNDEEIFA SEFVTFVGQV
0701: IGVVVADTQE NAKLAARKVH VKYEELPAIL SIEDALKAKS FLPNTERHIE KGDVDLCFQS GCCDKILEGE VHVGGQEHFY LETNSSLVWT TDSGNEVHMI
0801: SSTQCPQKHQ KYVSHVLGLP MSKVVCKTKR IGGGFGGKET RSACFAAVAC VPSYLLNRPV KLTLDRDIDM MISGQRHTFL GKYKVGFTND GKVQALDLEI
0901: YNNGGNSLDL SGAVLERAMF HSDNVYDIPN VRINGKVCLT NFPSHTAFRG FGGPQGMLIT ENWIQRIATE LKKSPEEIRE INFQSEGCVT HYGQQLQHFT
1001: LPRVWNELKS SCEFLKARGE VDQFNLQNRW KKRGVAMVPT KFGISFTTKF MNQAGALVHV YTDGTVLVTH GGVEMGQGLH TKVAQVAASS FNIPLSSVFI
1101: SETSTDKVPN STPTAASASS DMYGAAVLDA CEQIKARMEP IASKRNFSSF AELVTACYLE RIDLSAHGFY ITPDIHFDWK TGKGSPFSYF TYGASFAEVE
1201: IDTLTGDFHT RVANVFLDLG HSINPAIDVG QIEGAFVQGL GWVALEELKW GDAAHKWIPP GCLYTCGPGS YKIPSINDVP LKFDVSLLKG APNPKAIHSS
1301: KAVGEPPFFL ASSVFFAIKD AIVAARREVG NKDWFPLDNP ATPERVRMAC LDEFAMQFVS SDFRPKLSV
0001: MGSLKKDGEI GDEFTEALLY VNGVRRVLPD GLAHMTLLEY LRDLGLTGTK LGCGEGGCGA CTVMVSSYDR KSKTSVHYAV NACLAPLYSV EGMHVISIEG
0101: LGHRKLGLHP VQESLASSHG SQCGFCTPGF IMSMYSLLRS SKNSPSEEEI EECLAGNLCR CTGYRPIVDA FRVFAKSDDA LYCGVSSLSL QDGSTICPST
0201: GKPCSCGSKT TNEVASCNED RFQSISYSDI DGAKYTDKEL IFPPELLLRK LTPLKLRGNG GITWYRPVCL QNLLELKANY PDAKLLVGNT EVGIEMRLKR
0301: LQYQVLISVA QVPELNALNV NDNGIEVGSA LRLSELLRLF RKIVKERPAH ETSACKAFIE QLKWFAGTQI RNVACIGGNI CTASPISDLN PLWMASRAEF
0401: RITNCNGDVR SIPAKDFFLG YRKVDMGSNE ILLSVFLPWT RPLEYVKEFK QAHRRDDDIA IVNGGMRVFL EDKGQQLFVS DASIAYGGVA PLSLCARKTE
0501: EFLIGKNWNK DLLQDALKVI QSDVVIKEDA PGGMVEFRKS LTLSFFFKFF LWVSHNVNNA NSAIETFPPS HMSAVQPVPR LSRIGKQDYE TVKQGTSVGS
0601: SEVHLSARMQ VTGEAEYTDD TPVPPNTLHA AFVLSKVPHA RILSIDDSAA KSSSGFVGLF LAKDIPGDNM IGPIVPDEEL FATDVVTCVG QVIGVVVADT
0701: HENAKTAAGK VDVRYEELPA ILSIKEAINA KSFHPNTEKR LRKGDVELCF QSGQCDRVIE GEVQMGGQEH FYLEPNGSLV WTVDGGSEVH MISSTQAPQK
0801: HQKYVSHVLG LPMSKVVCKT KRIGGGFGGK ETRSAFIAAA ASVPSYLLNR PVKLILDRDV DMMITGHRHS FLGKYKVGFT NEGKILALDL EIYNNGGNSL
0901: DLSLSVLERA MFHSDNVYEI PHVRIVGNVC FTNFPSNTAF RGFGGPQGML ITENWIQRIA AELNKSPEEI KEMNFQVEGS VTHYCQTLQH CTLHQLWKEL
1001: KVSCNFLKAR READEFNSHN RWKKRGVAMV PTKFGISFTT KFMNQAGALV HVYTDGTVLV THGGVEMGQG LHTKVAQVAA SAFNIPLSSV FVSETSTDKV
1101: PNASPTAASA SSDMYGAAVL DACEQIIARM EPVASKHNFN TFTELVSACY FQRIDLSAHG FHIVPDLGFD WISGKGNAFR YYTYGAAFAE VEIDTLTGDF
1201: HTRAADIMLD LGYSLNPAID VGQIEGAFVQ GLGWVALEEL KWGDAAHKWI KPGSLLTCGP GNYKIPSIND MPFNLNVSLL KGNPNTKAIH SSKAVGEPPF
1301: FLASSVFFAI KEAIKAARTE VGLTDWFPLE SPATPERIRM ACFDEFSAPF VNSDFYPNLS V
0101: LGHRKLGLHP VQESLASSHG SQCGFCTPGF IMSMYSLLRS SKNSPSEEEI EECLAGNLCR CTGYRPIVDA FRVFAKSDDA LYCGVSSLSL QDGSTICPST
0201: GKPCSCGSKT TNEVASCNED RFQSISYSDI DGAKYTDKEL IFPPELLLRK LTPLKLRGNG GITWYRPVCL QNLLELKANY PDAKLLVGNT EVGIEMRLKR
0301: LQYQVLISVA QVPELNALNV NDNGIEVGSA LRLSELLRLF RKIVKERPAH ETSACKAFIE QLKWFAGTQI RNVACIGGNI CTASPISDLN PLWMASRAEF
0401: RITNCNGDVR SIPAKDFFLG YRKVDMGSNE ILLSVFLPWT RPLEYVKEFK QAHRRDDDIA IVNGGMRVFL EDKGQQLFVS DASIAYGGVA PLSLCARKTE
0501: EFLIGKNWNK DLLQDALKVI QSDVVIKEDA PGGMVEFRKS LTLSFFFKFF LWVSHNVNNA NSAIETFPPS HMSAVQPVPR LSRIGKQDYE TVKQGTSVGS
0601: SEVHLSARMQ VTGEAEYTDD TPVPPNTLHA AFVLSKVPHA RILSIDDSAA KSSSGFVGLF LAKDIPGDNM IGPIVPDEEL FATDVVTCVG QVIGVVVADT
0701: HENAKTAAGK VDVRYEELPA ILSIKEAINA KSFHPNTEKR LRKGDVELCF QSGQCDRVIE GEVQMGGQEH FYLEPNGSLV WTVDGGSEVH MISSTQAPQK
0801: HQKYVSHVLG LPMSKVVCKT KRIGGGFGGK ETRSAFIAAA ASVPSYLLNR PVKLILDRDV DMMITGHRHS FLGKYKVGFT NEGKILALDL EIYNNGGNSL
0901: DLSLSVLERA MFHSDNVYEI PHVRIVGNVC FTNFPSNTAF RGFGGPQGML ITENWIQRIA AELNKSPEEI KEMNFQVEGS VTHYCQTLQH CTLHQLWKEL
1001: KVSCNFLKAR READEFNSHN RWKKRGVAMV PTKFGISFTT KFMNQAGALV HVYTDGTVLV THGGVEMGQG LHTKVAQVAA SAFNIPLSSV FVSETSTDKV
1101: PNASPTAASA SSDMYGAAVL DACEQIIARM EPVASKHNFN TFTELVSACY FQRIDLSAHG FHIVPDLGFD WISGKGNAFR YYTYGAAFAE VEIDTLTGDF
1201: HTRAADIMLD LGYSLNPAID VGQIEGAFVQ GLGWVALEEL KWGDAAHKWI KPGSLLTCGP GNYKIPSIND MPFNLNVSLL KGNPNTKAIH SSKAVGEPPF
1301: FLASSVFFAI KEAIKAARTE VGLTDWFPLE SPATPERIRM ACFDEFSAPF VNSDFYPNLS V
Arabidopsis Description
XDH1Xanthine dehydrogenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUQ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.