Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G34890.1 | Thale cress | cytosol | 93.13 | 92.58 |
| CDX69096 | Canola | cytosol | 90.54 | 90.54 |
| Bra011570.1-P | Field mustard | cytosol | 90.76 | 90.49 |
| CDX75472 | Canola | cytosol | 90.76 | 90.49 |
| KRH23139 | Soybean | cytosol | 75.09 | 74.82 |
| TraesCS6B01G118400.1 | Wheat | mitochondrion | 19.14 | 74.64 |
| VIT_06s0004g02030.t01 | Wine grape | cytosol | 75.17 | 74.29 |
| KRH10197 | Soybean | cytosol | 70.95 | 74.25 |
| Solyc11g065920.1.1 | Tomato | cytosol, extracellular, unclear | 72.95 | 72.25 |
| GSMUA_Achr6P24950_001 | Banana | cytosol | 64.3 | 70.27 |
| Solyc11g065930.1.1 | Tomato | cytosol, unclear | 68.37 | 68.17 |
| Os03t0429800-01 | Rice | cytosol | 68.74 | 67.93 |
| Zm00001d029626_P005 | Maize | cytosol | 68.44 | 67.59 |
| TraesCS1A01G183800.1 | Wheat | cytosol | 68.37 | 67.57 |
| TraesCS1D01G192900.1 | Wheat | cytosol | 68.37 | 67.57 |
| HORVU1Hr1G049690.1 | Barley | cytosol | 68.29 | 67.49 |
| OQU92302 | Sorghum | cytosol | 68.37 | 67.47 |
| TraesCS1B01G205300.1 | Wheat | cytosol | 68.22 | 67.42 |
| TraesCS6D01G078500.1 | Wheat | cytosol | 67.55 | 66.62 |
| TraesCS6B01G118300.1 | Wheat | peroxisome | 38.8 | 63.1 |
| AT1G02590.1 | Thale cress | cytosol, peroxisome, plastid | 2.51 | 38.2 |
| AT3G43600.1 | Thale cress | cytosol, nucleus, peroxisome | 30.08 | 30.81 |
| AT1G04580.1 | Thale cress | cytosol, nucleus, peroxisome | 29.34 | 29.69 |
| AT2G27150.2 | Thale cress | cytosol, nucleus, peroxisome | 28.82 | 29.28 |
| AT5G20960.1 | Thale cress | cytosol, peroxisome, plastid | 29.42 | 29.09 |
Protein Annotations
| MapMan:10.1.2 | InterPro:2Fe-2S-bd | InterPro:2Fe-2S-bd_dom_sf | InterPro:2Fe-2S_ferredoxin-like_sf | InterPro:2Fe-2S_ferredoxin-type | InterPro:2Fe2S_fd_BS |
| Gene3D:3.30.365.10 | MapMan:6.1.4.5 | EntrezGene:829642 | ProteinID:AEE86435.1 | ProteinID:ANM67185.1 | ArrayExpress:AT4G34900 |
| EnsemblPlantsGene:AT4G34900 | RefSeq:AT4G34900 | TAIR:AT4G34900 | RefSeq:AT4G34900-TAIR-G | EnsemblPlants:AT4G34900.1 | TAIR:AT4G34900.1 |
| Symbol:ATXDH2 | EMBL:AY518202 | InterPro:AldOxase/xan_DH_Mopterin-bd | InterPro:AldOxase/xan_DH_Mopterin-bd_sf | InterPro:Ald_Oxase/Xan_DH_a/b | InterPro:Ald_Oxase/Xan_DH_a/b_sf |
| InterPro:Ald_Oxase/xanthine_DH | ProteinID:CAB45451.1 | ProteinID:CAB80207.1 | InterPro:CO_DH_flav_C | InterPro:CO_DH_flav_C_dom_sf | UniProt:F4JLI5 |
| InterPro:FAD-bd_2 | InterPro:FAD-bd_2-like_sf | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004854 |
| GO:GO:0005488 | GO:GO:0005506 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0006091 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 |
| GO:GO:0009056 | GO:GO:0009115 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0016614 | GO:GO:0016903 |
| GO:GO:0022900 | GO:GO:0046110 | GO:GO:0046872 | GO:GO:0050660 | GO:GO:0051536 | GO:GO:0051537 |
| GO:GO:0055114 | GO:GO:0071949 | InterPro:IPR001041 | InterPro:IPR016166 | InterPro:Mopterin_DH_FAD-bd | RefSeq:NP_001329029.1 |
| RefSeq:NP_195216.2 | PFAM:PF00111 | PFAM:PF00941 | PFAM:PF01315 | PFAM:PF01799 | PFAM:PF02738 |
| PFAM:PF03450 | PIRSF:PIRSF000127 | PO:PO:0000293 | ScanProsite:PS00197 | PFscan:PS51085 | PFscan:PS51387 |
| PANTHER:PTHR11908 | PANTHER:PTHR11908:SF100 | SMART:SM01008 | SMART:SM01092 | SUPFAM:SSF47741 | SUPFAM:SSF54292 |
| SUPFAM:SSF54665 | SUPFAM:SSF55447 | SUPFAM:SSF56003 | SUPFAM:SSF56176 | UniParc:UPI00005DC26B | SEG:seg |
Description
XDH2Xanthine dehydrogenase 2 [Source:UniProtKB/Swiss-Prot;Acc:F4JLI5]
Coordinates
chr4:-:16625517..16631370
Molecular Weight (calculated)
148771.0 Da
IEP (calculated)
6.705
GRAVY (calculated)
-0.090
Length
1353 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEQNEFMEAI MYVNGVRRVL PDGLAHMTLL EYLRDLGLTG TKLGCGEGGC GSCTVMVSSY DRESKTCVHY AVNACLAPLY SVEGMHVISI EGVGHRKLGL
0101: HPLQESLASS HGSQCGFCTP GFVMSMYALL RSSKNSPSEE EIEECLAGNL CRCTGYRPII DAFRVFAKSD DALYSGLSSL SLQDGSNICP STGKPCSCGS
0201: KTTSEAATCN EDRFQSISYS DIDGAKYTDK ELIFPPELLL RKLAPLKLGG NEGITWYRPV SLQNLLELKA NFPDAKLLVG NTEVGIEMRL KRLQYPVLIS
0301: AAQVPELNAL NVNDNGIEVG SALRLSELLR LFRKVVKERP AHETSACKAF IEQLKWFAGT QIRNVACIGG NICTASPISD LNPLWMASRA EFRIINCNGD
0401: VRSIPAKDFF LGYRKVDMGS NEILLSVFLP WTRPLEYVKE FKQAHRRDDD IAIVNGGMRV FLEEKGQQLF VSDASIVYGG VAPLSLRARN TEELLIGKNW
0501: NKCLLQDALK VIQSDVLIKE GAPGGMVEFR KSLTLSFFFK FFLWVTHHVN NVNPTIETFP PSHMSAVQLV PRFSRIGKQD YETVKQGTSV GLPEVHLSAR
0601: MQVTGEAEYT DDTPLPPCTL HAALVLSKVP HARILSVDDS AAKSSSGFVG LFLAKDVPGN NMIGPIVADE ELFATDVVTC VGQVIGVLVA DTHENAKTAA
0701: RKVDVRYQEL PAILSIKEAI NAKSFHPNTE RRLRKGDVEL CFQSGQCDRI IEGEVQMGGQ EHFYLEPNGS LVWTIDGGNE VHMISSTQAP QQHQKYVSHV
0801: LGLPMSKVVC KTKRLGGGFG GKETRSAFIA AAASVPSYLL NRPVKLILDR DVDMMITGHR HSFVGKYKVG FTNEGKILAL DLEIYNNGGN SMDLSLSNLE
0901: RAMFHSDNVY EIPHVRIVGN VCFTNFPSNT AFRGFGGPQG MLITENWIQR IAAELDKIPE EIKEMNFQVE GSITHYFQSL QHCTLHQLWK ELKVSSNFLK
1001: TRREADEFNS HNRWKKRGVA MVPTKFGISF TTKFMNQAGA LVHVYTDGTV LVTHGGVEMG QGLHTKVAQV AATAFNILLS SVFVSETSTD KVPNASPTAA
1101: SASSDMYGAA VLDACEQIIA RMEPVASKHN FNTFSELASA CYFQRIDLSA HGFHIVPELE FDWVSGKGNA YRYYTYGAAF AEVEIDTLTG DFHTRKADIM
1201: LDLGYSLNPT IDIGQIEGAF VQGLGWVALE ELKWGDAAHK WIKPGSLLTC GPGSYKIPSI NDMPFQLNVS LLKGNPNAKA IHSSKAVGEP PFFLAASAFF
1301: AIKEAIKAAR SEVGLTNWFP LETPATPERI RMACFDEFSA PFANSDFCPK LSV
0101: HPLQESLASS HGSQCGFCTP GFVMSMYALL RSSKNSPSEE EIEECLAGNL CRCTGYRPII DAFRVFAKSD DALYSGLSSL SLQDGSNICP STGKPCSCGS
0201: KTTSEAATCN EDRFQSISYS DIDGAKYTDK ELIFPPELLL RKLAPLKLGG NEGITWYRPV SLQNLLELKA NFPDAKLLVG NTEVGIEMRL KRLQYPVLIS
0301: AAQVPELNAL NVNDNGIEVG SALRLSELLR LFRKVVKERP AHETSACKAF IEQLKWFAGT QIRNVACIGG NICTASPISD LNPLWMASRA EFRIINCNGD
0401: VRSIPAKDFF LGYRKVDMGS NEILLSVFLP WTRPLEYVKE FKQAHRRDDD IAIVNGGMRV FLEEKGQQLF VSDASIVYGG VAPLSLRARN TEELLIGKNW
0501: NKCLLQDALK VIQSDVLIKE GAPGGMVEFR KSLTLSFFFK FFLWVTHHVN NVNPTIETFP PSHMSAVQLV PRFSRIGKQD YETVKQGTSV GLPEVHLSAR
0601: MQVTGEAEYT DDTPLPPCTL HAALVLSKVP HARILSVDDS AAKSSSGFVG LFLAKDVPGN NMIGPIVADE ELFATDVVTC VGQVIGVLVA DTHENAKTAA
0701: RKVDVRYQEL PAILSIKEAI NAKSFHPNTE RRLRKGDVEL CFQSGQCDRI IEGEVQMGGQ EHFYLEPNGS LVWTIDGGNE VHMISSTQAP QQHQKYVSHV
0801: LGLPMSKVVC KTKRLGGGFG GKETRSAFIA AAASVPSYLL NRPVKLILDR DVDMMITGHR HSFVGKYKVG FTNEGKILAL DLEIYNNGGN SMDLSLSNLE
0901: RAMFHSDNVY EIPHVRIVGN VCFTNFPSNT AFRGFGGPQG MLITENWIQR IAAELDKIPE EIKEMNFQVE GSITHYFQSL QHCTLHQLWK ELKVSSNFLK
1001: TRREADEFNS HNRWKKRGVA MVPTKFGISF TTKFMNQAGA LVHVYTDGTV LVTHGGVEMG QGLHTKVAQV AATAFNILLS SVFVSETSTD KVPNASPTAA
1101: SASSDMYGAA VLDACEQIIA RMEPVASKHN FNTFSELASA CYFQRIDLSA HGFHIVPELE FDWVSGKGNA YRYYTYGAAF AEVEIDTLTG DFHTRKADIM
1201: LDLGYSLNPT IDIGQIEGAF VQGLGWVALE ELKWGDAAHK WIKPGSLLTC GPGSYKIPSI NDMPFQLNVS LLKGNPNAKA IHSSKAVGEP PFFLAASAFF
1301: AIKEAIKAAR SEVGLTNWFP LETPATPERI RMACFDEFSA PFANSDFCPK LSV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.