Factsheet for Bra011570.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75472	Canola	cytosol	99.19	99.19
AT4G34890.1	Thale cress	cytosol	92.85	92.58
AT4G34900.1	Thale cress	cytosol	90.49	90.76
Bra036289.1-P	Field mustard	cytosol	83.05	83.17
KRH23139	Soybean	cytosol	76.79	76.73
TraesCS6B01G118400.1	Wheat	mitochondrion	19.6	76.66
VIT_06s0004g02030.t01	Wine grape	cytosol	77.16	76.48
KRH10197	Soybean	cytosol	72.37	75.95
Solyc11g065920.1.1	Tomato	cytosol, extracellular, unclear	73.99	73.5
GSMUA_Achr6P24950_001	Banana	cytosol	65.29	71.57
Solyc11g065930.1.1	Tomato	cytosol, unclear	68.98	68.98
Os03t0429800-01	Rice	cytosol	69.27	68.66
Zm00001d029626_P005	Maize	cytosol	69.27	68.61
HORVU1Hr1G049690.1	Barley	cytosol	69.12	68.52
OQU92302	Sorghum	cytosol	69.2	68.49
TraesCS1A01G183800.1	Wheat	cytosol	68.9	68.3
TraesCS1B01G205300.1	Wheat	cytosol	68.9	68.3
TraesCS1D01G192900.1	Wheat	cytosol	68.9	68.3
TraesCS6D01G078500.1	Wheat	cytosol	68.02	67.27
TraesCS6B01G118300.1	Wheat	peroxisome	38.1	62.14
Bra034975.1-P	Field mustard	cytosol	28.96	31.59
Bra019448.1-P	Field mustard	cytosol, peroxisome, plastid	29.77	31.1
Bra002347.1-P	Field mustard	cytosol	30.88	30.72
Bra015330.1-P	Field mustard	cytosol, peroxisome, plastid	29.7	30.1
Bra034325.1-P	Field mustard	cytosol	20.27	29.96
Bra020140.1-P	Field mustard	cytosol	29.7	29.92
Bra034974.1-P	Field mustard	cytosol	5.82	28.21

Protein Annotations

MapMan:10.1.2	InterPro:2Fe-2S-bd	InterPro:2Fe-2S-bd_dom_sf	InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	InterPro:2Fe2S_fd_BS
Gene3D:3.30.365.10	MapMan:6.1.4.5	InterPro:AldOxase/xan_DH_Mopterin-bd	InterPro:AldOxase/xan_DH_Mopterin-bd_sf	InterPro:Ald_Oxase/Xan_DH_a/b	InterPro:Ald_Oxase/Xan_DH_a/b_sf
InterPro:Ald_Oxase/xanthine_DH	EnsemblPlantsGene:Bra011570	EnsemblPlants:Bra011570.1	EnsemblPlants:Bra011570.1-P	InterPro:CO_DH_flav_C	InterPro:CO_DH_flav_C_dom_sf
InterPro:FAD-bd_2	InterPro:FAD-bd_2-like_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005506	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0016491	GO:GO:0016614	GO:GO:0022900	GO:GO:0046872	GO:GO:0050660	GO:GO:0051536
GO:GO:0051537	GO:GO:0055114	GO:GO:0071949	InterPro:IPR001041	InterPro:IPR016166	UniProt:M4D513
InterPro:Mopterin_DH_FAD-bd	PFAM:PF00111	PFAM:PF00941	PFAM:PF01315	PFAM:PF01799	PFAM:PF02738
PFAM:PF03450	PIRSF:PIRSF000127	ScanProsite:PS00197	PFscan:PS51085	PFscan:PS51387	PANTHER:PTHR11908
PANTHER:PTHR11908:SF100	SMART:SM01008	SMART:SM01092	SUPFAM:SSF47741	SUPFAM:SSF54292	SUPFAM:SSF54665
SUPFAM:SSF55447	SUPFAM:SSF56003	SUPFAM:SSF56176	UniParc:UPI0002545507	SEG:seg	:

Description

AT4G34890 (E=0.0) ATXDH1, XDH1 | XDH1 (XANTHINE DEHYDROGENASE 1); xanthine dehydrogenase

Coordinates

chrA01:+:1636449..1642795

Molecular Weight (calculated)

148826.0 Da

IEP (calculated)

6.333

GRAVY (calculated)

-0.086

Length

1357 amino acids

Sequence
(BLAST)

0001: MGSLKNDGEL TEAILYVNGV RRVLPDGLAH MTLLEYLRDI GLTGTKLGCG EGGCGACTVM VSNYDIKSKT CEHYAVNACL APLYSVEGMH VISIEGIGHR
0101: KLGLHPLQES LASAHGSQCG FCTPGFIMSM YALLRSSKNS PCEEEIEECL AGNLCRCTGY RPIVDAFRVF AKSDDALYSG VSSLRLEDGS TICPSTGKPC
0201: SCGSKATNGE GNCNEDRIQS ISYSDIDGAK YTEKELIFPP ELLLRKLSPL KLRGNGGLTW FRPVSLQNLL ELKANYPDAK LLVGNTEVGI EMRLKRLQYQ
0301: VLISVAQVPE LNALNVDDNG VELGSALRLS ELLRLFRRVV KERPEHETSA CKAFIEQLKW FAGTQIRNVA CIGGNICTAS PISDLNPLWM ASRAEFRIVN
0401: CSGEVRSIPA KDFFLGYRKV DMGSNEILLS VFLPWTRPLE YVKEFKQAHR RDDDIAIVNG GMRVFLEEKG QELFVSDASI AYGGVAPLSL RARKTEEFLI
0501: GKKWNKGLLE DALEVIQSDV LIKDDAPGGM VEFRKSLTLS FFFKFFLWVS HDVHSVYPTV ETFPPSHVSA LQPVPRLSRS GKQDYETVKQ GTSVGSPEVH
0601: LSARMQVTGE AEYTDDTPVP PNTLHAALVL SKMPHARILS IDDSAAKSSL GFVGLFLAKD IPGDNMIGPI VADEELFATD VVTCVGQVIG VVVADTHENA
0701: KTAAGKVEVM YEELPAILSI KEAINAKSFH PNTEKRLRKG DVELCFQSGE CDRIIEGEVQ IGGQEHFYLE PHGSLVWTLD GGNEVHMISS TQAPQKHQKY
0801: VSHVLGLPMS KVVCKTKRIG GGFGGKETRS AFIAAAAAVP SYLLNRPVKL ILDRDVDMMI TGHRHSFLGK YKVGFTNEGK ILALDLEIYN NGGNSLDLSL
0901: AILERAMFHS DNVYEIPHVR IIGNVCFTNF PSNTAFRGFG GPQGMLITEN WIQRIAAELD KTPEEIKEMN FQEEGSITHY SQSLQHCTLQ QLWKELKESS
1001: NFLKARREAD EFNSQNRWKK RGVAIVPTKF GISFTTKFMN QAGALVHVYT DGTVLVTHGG VEMGQGLHTK VAQVAASAFN IPLSSVFVSE TSTDKVPNAS
1101: PTAASASSDM YGAAVLDACE QIIARIEPVA SKHNFNTFAE LVSACYFQRI DLSAHGFHIV PEIGFDWISG KGNAFRYYTY GAAFAEVEID TLTGDFHTRA
1201: ADIMLDLGYS LNPAIDVGQI EGAFVQGLGW VALEELKWGD AAHKWIRPGT LLTCGPGNYK IPSINDVPFN LNVSLLKGNP NLKAIHSSKA VGEPPFFLAS
1301: SVFFAIKEAI KAARTEVGLT KWFPLETPAT PERIRMACFD EFSAPFVSSD FSPKLSV

Best Arabidopsis Sequence Match ( AT4G34890.1 )
(BLAST)

0001: MGSLKKDGEI GDEFTEALLY VNGVRRVLPD GLAHMTLLEY LRDLGLTGTK LGCGEGGCGA CTVMVSSYDR KSKTSVHYAV NACLAPLYSV EGMHVISIEG
0101: LGHRKLGLHP VQESLASSHG SQCGFCTPGF IMSMYSLLRS SKNSPSEEEI EECLAGNLCR CTGYRPIVDA FRVFAKSDDA LYCGVSSLSL QDGSTICPST
0201: GKPCSCGSKT TNEVASCNED RFQSISYSDI DGAKYTDKEL IFPPELLLRK LTPLKLRGNG GITWYRPVCL QNLLELKANY PDAKLLVGNT EVGIEMRLKR
0301: LQYQVLISVA QVPELNALNV NDNGIEVGSA LRLSELLRLF RKIVKERPAH ETSACKAFIE QLKWFAGTQI RNVACIGGNI CTASPISDLN PLWMASRAEF
0401: RITNCNGDVR SIPAKDFFLG YRKVDMGSNE ILLSVFLPWT RPLEYVKEFK QAHRRDDDIA IVNGGMRVFL EDKGQQLFVS DASIAYGGVA PLSLCARKTE
0501: EFLIGKNWNK DLLQDALKVI QSDVVIKEDA PGGMVEFRKS LTLSFFFKFF LWVSHNVNNA NSAIETFPPS HMSAVQPVPR LSRIGKQDYE TVKQGTSVGS
0601: SEVHLSARMQ VTGEAEYTDD TPVPPNTLHA AFVLSKVPHA RILSIDDSAA KSSSGFVGLF LAKDIPGDNM IGPIVPDEEL FATDVVTCVG QVIGVVVADT
0701: HENAKTAAGK VDVRYEELPA ILSIKEAINA KSFHPNTEKR LRKGDVELCF QSGQCDRVIE GEVQMGGQEH FYLEPNGSLV WTVDGGSEVH MISSTQAPQK
0801: HQKYVSHVLG LPMSKVVCKT KRIGGGFGGK ETRSAFIAAA ASVPSYLLNR PVKLILDRDV DMMITGHRHS FLGKYKVGFT NEGKILALDL EIYNNGGNSL
0901: DLSLSVLERA MFHSDNVYEI PHVRIVGNVC FTNFPSNTAF RGFGGPQGML ITENWIQRIA AELNKSPEEI KEMNFQVEGS VTHYCQTLQH CTLHQLWKEL
1001: KVSCNFLKAR READEFNSHN RWKKRGVAMV PTKFGISFTT KFMNQAGALV HVYTDGTVLV THGGVEMGQG LHTKVAQVAA SAFNIPLSSV FVSETSTDKV
1101: PNASPTAASA SSDMYGAAVL DACEQIIARM EPVASKHNFN TFTELVSACY FQRIDLSAHG FHIVPDLGFD WISGKGNAFR YYTYGAAFAE VEIDTLTGDF
1201: HTRAADIMLD LGYSLNPAID VGQIEGAFVQ GLGWVALEEL KWGDAAHKWI KPGSLLTCGP GNYKIPSIND MPFNLNVSLL KGNPNTKAIH SSKAVGEPPF
1301: FLASSVFFAI KEAIKAARTE VGLTDWFPLE SPATPERIRM ACFDEFSAPF VNSDFYPNLS V

Arabidopsis Description

XDH1Xanthine dehydrogenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUQ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.