Factsheet for AT4G34890.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G34900.1	Thale cress	cytosol	92.58	93.13
CDX69096	Canola	cytosol	92.43	92.98
Bra011570.1-P	Field mustard	cytosol	92.58	92.85
CDX75472	Canola	cytosol	92.58	92.85
KRH23139	Soybean	cytosol	76.71	76.88
KRH10197	Soybean	cytosol	72.59	76.41
TraesCS6B01G118400.1	Wheat	mitochondrion	19.47	76.37
VIT_06s0004g02030.t01	Wine grape	cytosol	76.71	76.26
Solyc11g065920.1.1	Tomato	cytosol, extracellular, unclear	74.21	73.94
GSMUA_Achr6P24950_001	Banana	cytosol	65.61	72.13
Os03t0429800-01	Rice	cytosol	69.51	69.1
Zm00001d029626_P005	Maize	cytosol	69.36	68.91
Solyc11g065930.1.1	Tomato	cytosol, unclear	68.7	68.9
OQU92302	Sorghum	cytosol	69.36	68.85
HORVU1Hr1G049690.1	Barley	cytosol	69.14	68.74
TraesCS1A01G183800.1	Wheat	cytosol	68.92	68.52
TraesCS1D01G192900.1	Wheat	cytosol	68.92	68.52
TraesCS1B01G205300.1	Wheat	cytosol	68.85	68.44
TraesCS6D01G078500.1	Wheat	cytosol	68.04	67.49
TraesCS6B01G118300.1	Wheat	peroxisome	38.28	62.62
AT1G02590.1	Thale cress	cytosol, peroxisome, plastid	2.57	39.33
AT3G43600.1	Thale cress	cytosol, nucleus, peroxisome	30.27	31.19
AT1G04580.1	Thale cress	cytosol, nucleus, peroxisome	29.24	29.77
AT5G20960.1	Thale cress	cytosol, peroxisome, plastid	29.68	29.53
AT2G27150.2	Thale cress	cytosol, nucleus, peroxisome	28.8	29.43

Protein Annotations

MapMan:10.1.2	InterPro:2Fe-2S-bd	InterPro:2Fe-2S-bd_dom_sf	InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	InterPro:2Fe2S_fd_BS
Gene3D:3.30.365.10	MapMan:6.1.4.5	EntrezGene:829641	ProteinID:AEE86434.1	ArrayExpress:AT4G34890	EnsemblPlantsGene:AT4G34890
RefSeq:AT4G34890	TAIR:AT4G34890	RefSeq:AT4G34890-TAIR-G	EnsemblPlants:AT4G34890.1	TAIR:AT4G34890.1	Symbol:ATXDH1
EMBL:AY171562	InterPro:AldOxase/xan_DH_Mopterin-bd	InterPro:AldOxase/xan_DH_Mopterin-bd_sf	InterPro:Ald_Oxase/Xan_DH_a/b	InterPro:Ald_Oxase/Xan_DH_a/b_sf	InterPro:Ald_Oxase/xanthine_DH
Unigene:At.27839	ProteinID:CAB45450.1	ProteinID:CAB80206.1	InterPro:CO_DH_flav_C	InterPro:CO_DH_flav_C_dom_sf	InterPro:FAD-bd_2
InterPro:FAD-bd_2-like_sf	GO:GO:0000166	GO:GO:0000302	GO:GO:0003674	GO:GO:0003824	GO:GO:0004854
GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006091	GO:GO:0006139	GO:GO:0006145	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009056	GO:GO:0009115	GO:GO:0009414	GO:GO:0009628
GO:GO:0009987	GO:GO:0016491	GO:GO:0016614	GO:GO:0016903	GO:GO:0022900	GO:GO:0042554
GO:GO:0046110	GO:GO:0046872	GO:GO:0050660	GO:GO:0051536	GO:GO:0051537	GO:GO:0055114
GO:GO:0071949	InterPro:IPR001041	InterPro:IPR016166	InterPro:Mopterin_DH_FAD-bd	RefSeq:NP_195215.2	PFAM:PF00111
PFAM:PF00941	PFAM:PF01315	PFAM:PF01799	PFAM:PF02738	PFAM:PF03450	PIRSF:PIRSF000127
PO:PO:0000293	ScanProsite:PS00197	PFscan:PS51085	PFscan:PS51387	PANTHER:PTHR11908	PANTHER:PTHR11908:SF100
UniProt:Q8GUQ8	SMART:SM01008	SMART:SM01092	SUPFAM:SSF47741	SUPFAM:SSF54292	SUPFAM:SSF54665
SUPFAM:SSF55447	SUPFAM:SSF56003	SUPFAM:SSF56176	UniParc:UPI00000AE1CE	SEG:seg	:

Description

XDH1Xanthine dehydrogenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUQ8]

Coordinates

chr4:-:16618573..16625191

Molecular Weight (calculated)

149204.0 Da

IEP (calculated)

6.641

GRAVY (calculated)

-0.096

Length

1361 amino acids

Sequence
(BLAST)

0001: MGSLKKDGEI GDEFTEALLY VNGVRRVLPD GLAHMTLLEY LRDLGLTGTK LGCGEGGCGA CTVMVSSYDR KSKTSVHYAV NACLAPLYSV EGMHVISIEG
0101: LGHRKLGLHP VQESLASSHG SQCGFCTPGF IMSMYSLLRS SKNSPSEEEI EECLAGNLCR CTGYRPIVDA FRVFAKSDDA LYCGVSSLSL QDGSTICPST
0201: GKPCSCGSKT TNEVASCNED RFQSISYSDI DGAKYTDKEL IFPPELLLRK LTPLKLRGNG GITWYRPVCL QNLLELKANY PDAKLLVGNT EVGIEMRLKR
0301: LQYQVLISVA QVPELNALNV NDNGIEVGSA LRLSELLRLF RKIVKERPAH ETSACKAFIE QLKWFAGTQI RNVACIGGNI CTASPISDLN PLWMASRAEF
0401: RITNCNGDVR SIPAKDFFLG YRKVDMGSNE ILLSVFLPWT RPLEYVKEFK QAHRRDDDIA IVNGGMRVFL EDKGQQLFVS DASIAYGGVA PLSLCARKTE
0501: EFLIGKNWNK DLLQDALKVI QSDVVIKEDA PGGMVEFRKS LTLSFFFKFF LWVSHNVNNA NSAIETFPPS HMSAVQPVPR LSRIGKQDYE TVKQGTSVGS
0601: SEVHLSARMQ VTGEAEYTDD TPVPPNTLHA AFVLSKVPHA RILSIDDSAA KSSSGFVGLF LAKDIPGDNM IGPIVPDEEL FATDVVTCVG QVIGVVVADT
0701: HENAKTAAGK VDVRYEELPA ILSIKEAINA KSFHPNTEKR LRKGDVELCF QSGQCDRVIE GEVQMGGQEH FYLEPNGSLV WTVDGGSEVH MISSTQAPQK
0801: HQKYVSHVLG LPMSKVVCKT KRIGGGFGGK ETRSAFIAAA ASVPSYLLNR PVKLILDRDV DMMITGHRHS FLGKYKVGFT NEGKILALDL EIYNNGGNSL
0901: DLSLSVLERA MFHSDNVYEI PHVRIVGNVC FTNFPSNTAF RGFGGPQGML ITENWIQRIA AELNKSPEEI KEMNFQVEGS VTHYCQTLQH CTLHQLWKEL
1001: KVSCNFLKAR READEFNSHN RWKKRGVAMV PTKFGISFTT KFMNQAGALV HVYTDGTVLV THGGVEMGQG LHTKVAQVAA SAFNIPLSSV FVSETSTDKV
1101: PNASPTAASA SSDMYGAAVL DACEQIIARM EPVASKHNFN TFTELVSACY FQRIDLSAHG FHIVPDLGFD WISGKGNAFR YYTYGAAFAE VEIDTLTGDF
1201: HTRAADIMLD LGYSLNPAID VGQIEGAFVQ GLGWVALEEL KWGDAAHKWI KPGSLLTCGP GNYKIPSIND MPFNLNVSLL KGNPNTKAIH SSKAVGEPPF
1301: FLASSVFFAI KEAIKAARTE VGLTDWFPLE SPATPERIRM ACFDEFSAPF VNSDFYPNLS V

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.