CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG21735

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53280.1	KXG21735	AT5G05410.1	18552202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0531200-01	Rice	plastid	78.1	87.82
Zm00001d046135_P001	Maize	plastid	83.97	85.13
TraesCS7A01G349100.1	Wheat	plastid	79.23	80.69
TraesCS7D01G329500.1	Wheat	golgi, plastid	79.01	80.46
HORVU7Hr1G079640.2	Barley	plastid	78.78	76.87
GSMUA_Achr8P19930_001	Banana	cytosol	63.88	75.67
TraesCS7B01G233600.2	Wheat	mitochondrion	78.78	74.57
PGSC0003DMT400032252	Potato	cytosol, peroxisome, plastid	59.59	67.52
Solyc07g062610.2.1	Tomato	plastid	59.14	67.01
VIT_19s0014g01520.t01	Wine grape	plastid	64.11	66.2
CDY24104	Canola	cytosol	58.47	65.9
Bra039666.1-P	Field mustard	cytosol	58.24	65.65
Bra030947.1-P	Field mustard	plastid	58.92	60.98
CDY02515	Canola	plastid	58.92	60.98
KRH27320	Soybean	nucleus	59.82	60.92
CDY59398	Canola	plastid	58.47	60.51
KRH21993	Soybean	endoplasmic reticulum, nucleus	59.59	60.41
OQU86107	Sorghum	cytosol	43.12	60.25
CDX95299	Canola	cytosol	53.05	60.1
AT1G53280.1	Thale cress	plastid	59.37	60.05
Bra033480.1-P	Field mustard	cytosol	52.6	59.59
AT3G14990.1	Thale cress	cytosol	52.6	59.44
Bra027286.1-P	Field mustard	cytosol	52.6	59.44
CDX82455	Canola	cytosol, golgi, mitochondrion	52.6	59.44
CDY23161	Canola	cytosol	52.37	59.34
Bra001577.1-P	Field mustard	cytosol, golgi, mitochondrion	52.37	59.18
CDX98521	Canola	cytosol	52.14	58.93
CDX97625	Canola	cytosol	51.92	58.67
CDX75800	Canola	cytosol, golgi, mitochondrion	51.92	58.67
CDY25999	Canola	golgi, plastid	58.69	52.63
KXG25313	Sorghum	plastid	42.44	41.05
OQU86110	Sorghum	extracellular, plasma membrane	37.92	39.44
VIT_15s0024g01260.t01	Wine grape	cytosol	18.51	34.02

Protein Annotations

EnsemblPlants:EER89866	EnsemblPlantsGene:SORBI_3010G155600	EntrezGene:8072643	Gene3D:3.40.50.880	InterPro:Class_I_gatase-like	InterPro:DJ-1
InterPro:DJ-1/PfpI	InterPro:IPR029062	PANTHER:PTHR43444	PANTHER:PTHR43444:SF8	PFAM:PF01965	ProteinID:EER89866
ProteinID:EER89866.1	RefSeq:XP_002438499.1	SEG:seg	SUPFAM:SSF52317	TIGRFAMs:TIGR01383	unigene:Sbi.2243
UniParc:UPI0001A897A8	UniProt:C5Z3P7	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:45932819..45938968

Molecular Weight (calculated)

47289.7 Da

IEP (calculated)

7.499

GRAVY (calculated)

0.030

Length

443 amino acids

Sequence
(BLAST)

001: MATRPLTTAL PLSKTPRGTP SSHHSPPPLL RRLQTLTRAL ASSSSQAMAS SSPAPKKVLV PIANGTEPME AVITIDVLRR AGAHVAVASV EPGAATVAAS
101: WGVKLAADAL LADLADDEFD LISLPGGMPG SSTFRDCKVL ENMVKKHVEK GKLYAAICAA PAMALGTWGL LNGLKATCYP SFMDKLPSEV HAVESRVQID
201: GKCVTSRGPG TAMEYSVILV EQLYGKEKAN EVAGPMVMRP QHGVEFSMKE LNSTSWNVGE TPNILVPIAN GTEEMEATMI IDILRRAKAN VVVASLEDKL
301: EIVASRKVKM IADVLLDNVL KEQYDLILLP GGLGGAEAYA KSDKLMDLIK KQAEANRLYG AICASPAIAF EPHGLLKGKK ATSYPAMWNK LADQSECDNR
401: VVVDGNLITS QGPGTSMEFS LAIVEKLFGR ERALELAKTM VFV

Best Arabidopsis Sequence Match ( AT1G53280.1 )
(BLAST)

001: MASSSLCHRY FNKITVTPFF NTKKLHHYSP RRISLRVNRR SFSISATMSS STKKVLIPVA HGTEPFEAVV MIDVLRRGGA DVTVASVENQ VGVDACHGIK
101: MVADTLLSDI TDSVFDLIML PGGLPGGETL KNCKPLEKMV KKQDTDGRLN AAICCAPALA FGTWGLLEGK KATCYPVFME KLAACATAVE SRVEIDGKIV
201: TSRGPGTTME FSVTLVEQLL GKEKAVEVSG PLVMRPNPGD EYTITELNQV SWSFEGTPQI LVPIADGSEE MEAVAIIDVL KRAKANVVVA ALGNSLEVVA
301: SRKVKLVADV LLDEAEKNSY DLIVLPGGLG GAEAFASSEK LVNMLKKQAE SNKPYGAICA SPALVFEPHG LLKGKKATAF PAMCSKLTDQ SHIEHRVLVD
401: GNLITSRGPG TSLEFALAIV EKFYGREKGL QLSKATLV

Arabidopsis Description

DJ1BProtein DJ-1 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.