Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS1A01G221900.1 | |
| TraesCS1B01G235100.2 | |
| TraesCS1D01G223600.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G53280.1 | TraesCS1A01G221900.1 | AT5G05410.1 | 18552202 |
| AT1G53280.1 | TraesCS1B01G235100.2 | AT5G05410.1 | 18552202 |
| AT1G53280.1 | TraesCS1D01G223600.2 | AT5G05410.1 | 18552202 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0531200-01 | Rice | plastid | 73.93 | 87.82 |
| TraesCS7D01G329500.1 | Wheat | golgi, plastid | 81.41 | 87.59 |
| TraesCS7A01G349100.1 | Wheat | plastid | 80.77 | 86.9 |
| HORVU7Hr1G079640.2 | Barley | plastid | 79.7 | 82.16 |
| EER89866 | Sorghum | plastid | 74.57 | 78.78 |
| Zm00001d046135_P001 | Maize | plastid | 72.44 | 77.57 |
| GSMUA_Achr8P19930_001 | Banana | cytosol | 59.83 | 74.87 |
| PGSC0003DMT400032252 | Potato | cytosol, peroxisome, plastid | 55.34 | 66.24 |
| VIT_19s0014g01520.t01 | Wine grape | plastid | 60.04 | 65.5 |
| Solyc07g062610.2.1 | Tomato | plastid | 54.7 | 65.47 |
| Bra039666.1-P | Field mustard | cytosol | 54.27 | 64.63 |
| CDY24104 | Canola | cytosol | 54.06 | 64.38 |
| KRH21993 | Soybean | endoplasmic reticulum, nucleus | 56.2 | 60.18 |
| KRH27320 | Soybean | nucleus | 55.56 | 59.77 |
| CDY59398 | Canola | plastid | 54.06 | 59.11 |
| AT3G14990.1 | Thale cress | cytosol | 49.15 | 58.67 |
| Bra030947.1-P | Field mustard | plastid | 53.42 | 58.41 |
| CDY02515 | Canola | plastid | 53.42 | 58.41 |
| CDX95299 | Canola | cytosol | 48.72 | 58.31 |
| AT1G53280.1 | Thale cress | plastid | 54.49 | 58.22 |
| Bra033480.1-P | Field mustard | cytosol | 48.5 | 58.06 |
| CDY23161 | Canola | cytosol | 48.29 | 57.8 |
| Bra027286.1-P | Field mustard | cytosol | 48.29 | 57.65 |
| CDX98521 | Canola | cytosol | 48.08 | 57.4 |
| CDX97625 | Canola | cytosol | 47.86 | 57.14 |
| CDX82455 | Canola | cytosol, golgi, mitochondrion | 47.44 | 56.63 |
| Bra001577.1-P | Field mustard | cytosol, golgi, mitochondrion | 47.22 | 56.38 |
| CDX75800 | Canola | cytosol, golgi, mitochondrion | 46.79 | 55.87 |
| TraesCS3B01G162300.1 | Wheat | mitochondrion | 50.43 | 55.53 |
| CDY25999 | Canola | golgi, plastid | 53.63 | 50.81 |
| TraesCS7B01G246500.1 | Wheat | plastid | 40.6 | 42.51 |
| VIT_15s0024g01260.t01 | Wine grape | cytosol | 19.02 | 36.93 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G233600.2 | EnsemblPlantsGene:TraesCS7B01G233600 | Gene3D:3.40.50.880 | InterPro:Class_I_gatase-like | InterPro:DJ-1 | InterPro:DJ-1/PfpI |
| InterPro:IPR029062 | PANTHER:PTHR43444 | PANTHER:PTHR43444:SF8 | PFAM:PF01965 | SEG:seg | SUPFAM:SSF52317 |
| TIGR:cd03135 | TIGRFAMs:TIGR01383 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr7B:-:437367464..437371626
Molecular Weight (calculated)
49612.1 Da
IEP (calculated)
7.180
GRAVY (calculated)
-0.012
Length
468 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSPSPSTRR TRCPPFWNSP PKLREKSTER NGHAATRLLH SHNVLLPFPT SSATPPPNPN PRACVLLPAA HGVVSSPEEG KQVLVPIANG TEPMEAVMTI
101: DVLRRAGADV AVASVEPGAA QVAASWGVKL AADALLADLA EADFDLISLP GGMPGASTFG DCKILENIVK KHAEKGKLYA AVCAAPAVAL GAWGLLNGLK
201: ATCHPSVMDK LPSEVQAVES RVQIDGNCVT SRGPGTTMEY SVVLVEQLYG KEKADEVAGP MVMRPQHGAE FSMKELNSTS WNAGENPQIL VPIANGTEEM
301: EAVMIIDILR RAKANVVVAS LEGTLEIVAS RNVKMVANVL LDDALKQQYD LILLPGGLGG AQAYAKSDKL IGFIKKQAEA NKLYGAICAS PAIALEPHGL
401: LKGKKATSYP AMWSKLTDQS ECKNRVVVDG NLITSQGPGT SMEFSLAIVE KLFGRERALE LAKSMVFV
101: DVLRRAGADV AVASVEPGAA QVAASWGVKL AADALLADLA EADFDLISLP GGMPGASTFG DCKILENIVK KHAEKGKLYA AVCAAPAVAL GAWGLLNGLK
201: ATCHPSVMDK LPSEVQAVES RVQIDGNCVT SRGPGTTMEY SVVLVEQLYG KEKADEVAGP MVMRPQHGAE FSMKELNSTS WNAGENPQIL VPIANGTEEM
301: EAVMIIDILR RAKANVVVAS LEGTLEIVAS RNVKMVANVL LDDALKQQYD LILLPGGLGG AQAYAKSDKL IGFIKKQAEA NKLYGAICAS PAIALEPHGL
401: LKGKKATSYP AMWSKLTDQS ECKNRVVVDG NLITSQGPGT SMEFSLAIVE KLFGRERALE LAKSMVFV
001: MASSSLCHRY FNKITVTPFF NTKKLHHYSP RRISLRVNRR SFSISATMSS STKKVLIPVA HGTEPFEAVV MIDVLRRGGA DVTVASVENQ VGVDACHGIK
101: MVADTLLSDI TDSVFDLIML PGGLPGGETL KNCKPLEKMV KKQDTDGRLN AAICCAPALA FGTWGLLEGK KATCYPVFME KLAACATAVE SRVEIDGKIV
201: TSRGPGTTME FSVTLVEQLL GKEKAVEVSG PLVMRPNPGD EYTITELNQV SWSFEGTPQI LVPIADGSEE MEAVAIIDVL KRAKANVVVA ALGNSLEVVA
301: SRKVKLVADV LLDEAEKNSY DLIVLPGGLG GAEAFASSEK LVNMLKKQAE SNKPYGAICA SPALVFEPHG LLKGKKATAF PAMCSKLTDQ SHIEHRVLVD
401: GNLITSRGPG TSLEFALAIV EKFYGREKGL QLSKATLV
101: MVADTLLSDI TDSVFDLIML PGGLPGGETL KNCKPLEKMV KKQDTDGRLN AAICCAPALA FGTWGLLEGK KATCYPVFME KLAACATAVE SRVEIDGKIV
201: TSRGPGTTME FSVTLVEQLL GKEKAVEVSG PLVMRPNPGD EYTITELNQV SWSFEGTPQI LVPIADGSEE MEAVAIIDVL KRAKANVVVA ALGNSLEVVA
301: SRKVKLVADV LLDEAEKNSY DLIVLPGGLG GAEAFASSEK LVNMLKKQAE SNKPYGAICA SPALVFEPHG LLKGKKATAF PAMCSKLTDQ SHIEHRVLVD
401: GNLITSRGPG TSLEFALAIV EKFYGREKGL QLSKATLV
Arabidopsis Description
DJ1BProtein DJ-1 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.