Factsheet for PGSC0003DMT400032252

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g062610.2.1	Tomato	plastid	97.95	97.95
GSMUA_Achr8P19930_001	Banana	cytosol	66.24	69.25
Bra039666.1-P	Field mustard	cytosol	67.77	67.43
Os06t0531200-01	Rice	plastid	67.52	67.01
CDY24104	Canola	cytosol	67.26	66.92
Bra030947.1-P	Field mustard	plastid	67.77	61.92
CDY59398	Canola	plastid	67.77	61.92
CDY02515	Canola	plastid	67.77	61.92
KRH21993	Soybean	endoplasmic reticulum, nucleus	68.03	60.87
KRH27320	Soybean	nucleus	67.26	60.46
AT1G53280.1	Thale cress	plastid	67.52	60.27
OQU86107	Sorghum	cytosol	48.34	59.62
EER89866	Sorghum	plastid	67.52	59.59
CDX95299	Canola	cytosol	59.59	59.59
TraesCS7D01G329500.1	Wheat	golgi, plastid	66.24	59.54
CDX82455	Canola	cytosol, golgi, mitochondrion	59.59	59.44
CDX75800	Canola	cytosol, golgi, mitochondrion	59.59	59.44
Bra027286.1-P	Field mustard	cytosol	59.34	59.18
Bra001577.1-P	Field mustard	cytosol, golgi, mitochondrion	59.34	59.18
Bra033480.1-P	Field mustard	cytosol	59.08	59.08
AT3G14990.1	Thale cress	cytosol	59.08	58.93
TraesCS7A01G349100.1	Wheat	plastid	65.47	58.85
CDY23161	Canola	cytosol	58.82	58.82
Zm00001d046135_P001	Maize	plastid	65.73	58.81
CDX98521	Canola	cytosol	58.82	58.67
CDX97625	Canola	cytosol	58.57	58.42
TraesCS7B01G233600.2	Wheat	mitochondrion	66.24	55.34
TraesCS3B01G162300.1	Wheat	mitochondrion	59.08	54.35
TraesCS3D01G144800.1	Wheat	mitochondrion	59.08	54.23
TraesCS3A01G142800.1	Wheat	mitochondrion	57.8	53.18
CDY25999	Canola	golgi, plastid	67.01	53.04
Os01t0217800-01	Rice	mitochondrion	57.8	52.8
Zm00001d039363_P001	Maize	mitochondrion	57.54	52.57
Os01t0217500-01	Rice	cytosol	49.36	48.86
TraesCS3D01G144900.1	Wheat	cytosol	47.83	47.46
TraesCS3A01G142700.1	Wheat	cytosol	47.31	46.72
TraesCS1D01G007700.1	Wheat	cytosol	54.48	46.2
OQU86110	Sorghum	extracellular, plasma membrane	45.01	41.31
VIT_15s0024g01260.t01	Wine grape	cytosol	21.99	35.68
PGSC0003DMT400066294	Potato	plastid	42.2	30.28
HORVU3Hr1G049070.10	Barley	cytosol, nucleus, plasma membrane	9.72	18.54

Protein Annotations

EnsemblPlants:PGSC0003DMT400032252	EnsemblPlantsGene:PGSC0003DMG400012391	Gene3D:3.40.50.880	InterPro:Class_I_gatase-like	InterPro:DJ-1	InterPro:DJ-1/PfpI
InterPro:IPR029062	PANTHER:PTHR43444	PANTHER:PTHR43444:SF8	PFAM:PF01965	PGSC:PGSC0003DMG400012391	SUPFAM:SSF52317
TIGRFAMs:TIGR01383	UniParc:UPI000295B053	UniProt:M1AX34	MapMan:35.1	:	:

Description

4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme [Source:PGSC_GENE;Acc:PGSC0003DMG400012391]

Coordinates

chr7:+:52756546..52760703

Molecular Weight (calculated)

41667.8 Da

IEP (calculated)

5.091

GRAVY (calculated)

0.162

Length

391 amino acids

Sequence
(BLAST)

001: MASATKKVLV PIAIGTEPIE AIVPIDILRR AGAEVIVASV ENQLQIEVMY GIKIVADALI SDCVDTEFDL ISLPGGVPGA ANLGNCKILE SIVKKQAENG
101: KLYAAICAAP AVALGSWGLL KGLKATCYPS YMEELSSHAI AVESRVQKDA KVVTSRGPAT SIEYAVALVE ELYGKEKANE VSGPLVMRPN HSEEFAFADL
201: NSVNWTLTSK PRILVPIANG SEEMEATIII DVLRRANAQV VVASLEDKLE IVASRKVKLV ADVLLDEAAK QSYDLIVLPG GLGGAETFAK SEKLVDMLKK
301: QRESSKPYGA MCASPALVLE PHGLLKGKKA TAFPALCNKL SDPSEAENRV VVDGNLVTSR GPGTTMEFAL AIADKFIGHK ETLELAKEMI F

Best Arabidopsis Sequence Match ( AT1G53280.1 )
(BLAST)

001: MASSSLCHRY FNKITVTPFF NTKKLHHYSP RRISLRVNRR SFSISATMSS STKKVLIPVA HGTEPFEAVV MIDVLRRGGA DVTVASVENQ VGVDACHGIK
101: MVADTLLSDI TDSVFDLIML PGGLPGGETL KNCKPLEKMV KKQDTDGRLN AAICCAPALA FGTWGLLEGK KATCYPVFME KLAACATAVE SRVEIDGKIV
201: TSRGPGTTME FSVTLVEQLL GKEKAVEVSG PLVMRPNPGD EYTITELNQV SWSFEGTPQI LVPIADGSEE MEAVAIIDVL KRAKANVVVA ALGNSLEVVA
301: SRKVKLVADV LLDEAEKNSY DLIVLPGGLG GAEAFASSEK LVNMLKKQAE SNKPYGAICA SPALVFEPHG LLKGKKATAF PAMCSKLTDQ SHIEHRVLVD
401: GNLITSRGPG TSLEFALAIV EKFYGREKGL QLSKATLV

Arabidopsis Description

DJ1BProtein DJ-1 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.