Factsheet for Solyc07g062610.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

plastid: 20363867
extracellular: 22364583
plastid: 22908117
nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032252	Potato	cytosol, peroxisome, plastid	97.95	97.95
GSMUA_Achr8P19930_001	Banana	cytosol	65.47	68.45
Bra039666.1-P	Field mustard	cytosol	67.01	66.67
Os06t0531200-01	Rice	plastid	66.75	66.24
CDY24104	Canola	cytosol	66.5	66.16
Bra030947.1-P	Field mustard	plastid	66.75	60.98
CDY59398	Canola	plastid	66.75	60.98
CDY02515	Canola	plastid	66.75	60.98
KRH21993	Soybean	endoplasmic reticulum, nucleus	67.26	60.18
KRH27320	Soybean	nucleus	66.75	60.0
AT1G53280.1	Thale cress	plastid	66.75	59.59
OQU86107	Sorghum	cytosol	48.08	59.31
EER89866	Sorghum	plastid	67.01	59.14
TraesCS7D01G329500.1	Wheat	golgi, plastid	65.73	59.08
CDX95299	Canola	cytosol	59.08	59.08
CDX82455	Canola	cytosol, golgi, mitochondrion	59.08	58.93
CDX75800	Canola	cytosol, golgi, mitochondrion	59.08	58.93
Bra027286.1-P	Field mustard	cytosol	58.82	58.67
Bra001577.1-P	Field mustard	cytosol, golgi, mitochondrion	58.82	58.67
Bra033480.1-P	Field mustard	cytosol	58.57	58.57
AT3G14990.1	Thale cress	cytosol	58.57	58.42
Zm00001d046135_P001	Maize	plastid	65.22	58.35
CDY23161	Canola	cytosol	58.31	58.31
CDX98521	Canola	cytosol	58.31	58.16
TraesCS7A01G349100.1	Wheat	plastid	64.71	58.16
CDX97625	Canola	cytosol	58.06	57.91
TraesCS7B01G233600.2	Wheat	mitochondrion	65.47	54.7
TraesCS3B01G162300.1	Wheat	mitochondrion	58.57	53.88
TraesCS3D01G144800.1	Wheat	mitochondrion	58.57	53.76
TraesCS3A01G142800.1	Wheat	mitochondrion	57.54	52.94
Os01t0217800-01	Rice	mitochondrion	57.54	52.57
CDY25999	Canola	golgi, plastid	66.24	52.43
Zm00001d039363_P001	Maize	mitochondrion	57.29	52.34
Os01t0217500-01	Rice	cytosol	49.36	48.86
TraesCS3D01G144900.1	Wheat	cytosol	48.08	47.72
TraesCS3A01G142700.1	Wheat	cytosol	47.57	46.97
TraesCS1D01G007700.1	Wheat	cytosol	54.48	46.2
Solyc01g108070.2.1	Tomato	cytosol	45.52	43.84
OQU86110	Sorghum	extracellular, plasma membrane	45.27	41.55
VIT_15s0024g01260.t01	Wine grape	cytosol	21.23	34.44
HORVU3Hr1G049070.10	Barley	cytosol, nucleus, plasma membrane	9.72	18.54

Protein Annotations

EnsemblPlants:Solyc07g062610.2.1	EnsemblPlantsGene:Solyc07g062610.2	Gene3D:3.40.50.880	InterPro:Class_I_gatase-like	InterPro:DJ-1	InterPro:DJ-1/PfpI
InterPro:IPR029062	PANTHER:PTHR43444	PANTHER:PTHR43444:SF8	PFAM:PF01965	SEG:seg	SUPFAM:SSF52317
TIGRFAMs:TIGR01383	UniParc:UPI000276B843	UniProt:K4CGU4	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr7:+:65304706..65309184

Molecular Weight (calculated)

41684.8 Da

IEP (calculated)

5.084

GRAVY (calculated)

0.153

Length

391 amino acids

Sequence
(BLAST)

001: MASATKKVLV PIANGTEPIE AIVPIDILRR AGAEVIVASV GNQLQIEVMY GIKIVADVLI TDCVDTEFDL ISLPGGVPGA ANLGNCKILE SIVKKQAENG
101: KLYAAICAAP AIALGSWGLL KGLKATCYPS YMEELSSHAI AVESRVQKDA KVVTSRGPAT SIEYAVALVE ELYGKEKANE VSGPLVMRPN HSEEFAFAEL
201: NSVNWTLTSK PRILVPIANG SEEMEATIII DVLRRANAQV VVASMEDKLE IVASRKVKLV ADVLLDEAAK QSYDLIVLPG GLGGAETFAK SEKLVDMLKK
301: QRESSKPYGA MCASPALVLE PHGLLQGKKA TAFPALCNKL SDPSEAENRV VVDGNLVTSR GPGTTMEFAL AIADKFIGHK ETLELAKEMI F

Best Arabidopsis Sequence Match ( AT1G53280.1 )
(BLAST)

001: MASSSLCHRY FNKITVTPFF NTKKLHHYSP RRISLRVNRR SFSISATMSS STKKVLIPVA HGTEPFEAVV MIDVLRRGGA DVTVASVENQ VGVDACHGIK
101: MVADTLLSDI TDSVFDLIML PGGLPGGETL KNCKPLEKMV KKQDTDGRLN AAICCAPALA FGTWGLLEGK KATCYPVFME KLAACATAVE SRVEIDGKIV
201: TSRGPGTTME FSVTLVEQLL GKEKAVEVSG PLVMRPNPGD EYTITELNQV SWSFEGTPQI LVPIADGSEE MEAVAIIDVL KRAKANVVVA ALGNSLEVVA
301: SRKVKLVADV LLDEAEKNSY DLIVLPGGLG GAEAFASSEK LVNMLKKQAE SNKPYGAICA SPALVFEPHG LLKGKKATAF PAMCSKLTDQ SHIEHRVLVD
401: GNLITSRGPG TSLEFALAIV EKFYGREKGL QLSKATLV

Arabidopsis Description

DJ1BProtein DJ-1 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.