Factsheet for Solyc01g108070.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	62.56	67.55
KRH71131	Soybean	cytosol, mitochondrion, nucleus	51.23	67.31
VIT_03s0063g00300.t01	Wine grape	plastid	73.89	67.11
KRH50291	Soybean	plastid	69.7	62.89
PGSC0003DMT400066294	Potato	plastid	82.76	61.65
KXG25313	Sorghum	plastid	61.58	54.59
Os05t0519600-02	Rice	plastid	60.59	54.19
CDX69022	Canola	plastid	61.33	54.13
CDY68228	Canola	plastid	61.33	54.13
Bra011486.1-P	Field mustard	plastid	61.08	53.91
TraesCS4A01G376600.1	Wheat	plastid	59.61	53.78
TraesCS7A01G334600.1	Wheat	plastid	59.11	53.69
TraesCS7D01G073600.1	Wheat	plastid	59.61	53.66
TraesCS7A01G334700.1	Wheat	plastid	53.69	53.56
TraesCS7D01G342200.1	Wheat	plastid	58.87	53.47
TraesCS7B01G246500.1	Wheat	plastid	58.62	53.24
CDY49268	Canola	plastid	40.89	53.21
AT4G34020.1	Thale cress	plastid	61.82	53.18
TraesCS7A01G078400.1	Wheat	plastid	58.62	52.65
HORVU7Hr1G082380.12	Barley	plastid	58.13	52.33
Bra017622.1-P	Field mustard	plastid	21.18	46.74
Solyc07g062610.2.1	Tomato	plastid	43.84	45.52
Zm00001d031784_P003	Maize	plastid	60.34	42.1

Protein Annotations

Gene3D:3.40.50.880	MapMan:35.1	InterPro:Class_I_gatase-like	InterPro:DJ-1	InterPro:DJ-1/PfpI	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536
GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	InterPro:IPR029062	UniProt:K4B323	PFAM:PF01965
PANTHER:PTHR43444	PANTHER:PTHR43444:SF8	SUPFAM:SSF52317	EnsemblPlantsGene:Solyc01g108070.2	EnsemblPlants:Solyc01g108070.2.1	TIGRFAMs:TIGR01383
UniParc:UPI000276805C	SEG:seg	:	:	:	:

Description

Protein DJ-1 homolog C [Source:Projected from Arabidopsis thaliana (AT4G34020) UniProtKB/Swiss-Prot;Acc:Q8VY09]

Coordinates

chr1:+:95434031..95439061

Molecular Weight (calculated)

43432.8 Da

IEP (calculated)

8.360

GRAVY (calculated)

0.108

Length

406 amino acids

Sequence
(BLAST)

001: MWSAPRIDPI TTTAASAPPK KVLVPIGFGT EEMEAVILAD VLRRAGAEVT VASVEKQLEV EAYGGTRLVA DTFISACSTE IFDLVALPGG MPGSARLRDC
101: EVLQKITSRQ AEEKRLYGAI CAAPAVALLP WGLLKRKQTT CHPAFIDKIS SFRAVKTNTQ VSGELTTSRG PGTSFEFAIC LVEQLFGEPV AREIGELLLM
201: NPAGDDPKRQ EFNEVGWSLD RTPQVLIPIA NGSEEIEVVT LIDILRRAKV NVVVASVEKS AQVLASSGTK IVADKLINAT SDSIFDLIIL PGGTAAAERL
301: HKSKILKKLL KEQESAGRIF GAICSSPAVL QKQGLIKDKK ATAHPAVLDK LKDGVNDAQV VIDGKLITSQ GLATAIQFAL AIVSKLFGHA RARSVAEGLV
401: YQYPRS

Best Arabidopsis Sequence Match ( AT4G34020.1 )
(BLAST)

001: MGSLGYSISM IASLSPTLME SRLISSMGCV SMTVAPSFSS VSVVSSSLGT TRRDRTLKLR SSMSPGMVTT LDSDVGVGSS ATTKKVLVPI GYGTEEIEAV
101: VLVDVLRRAG ADVTVASVEQ KLEVEGSSGT RLLADVLISK CADQVYDLVA LPGGMPGAVR LRDCEILEKI MKRQAEDKRL YGAISMAPAI TLLPWGLLTR
201: KRTTGHPAFF GKLPTFWAVK TNIQISGELT TSRGPGTSFQ FALSLAEQLF GETTAKSIEE FLLLRDGYQN PKNKEFNSID WSLDHTPRVL IPVANGSEAV
301: ELVSIADVLR RAKVDVTVSS VERSLRITAF QGTKIITDKL IGEAAESSYD LIILPGGHTG SERLQKSKIL KKLLREQHES GRIYGATNSS STVLHKHGLL
401: KEKRTTVYPS ESDEPMNQQM IEGAEVVIDG NVITSLGLAT VTKFSLAIVS KLFGHARARS VSEGLVHEYP RQ

Arabidopsis Description

DJ1CProtein DJ-1 homolog C [Source:UniProtKB/Swiss-Prot;Acc:Q8VY09]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.