Factsheet for TraesCS4A01G376600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	mitochondrion
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G334600.1	Wheat	plastid	92.22	92.84
TraesCS7A01G078400.1	Wheat	plastid	92.67	92.26
TraesCS7A01G334700.1	Wheat	plastid	82.44	91.15
HORVU7Hr1G082380.12	Barley	plastid	90.67	90.47
TraesCS7D01G073600.1	Wheat	plastid	87.11	86.92
Os05t0519600-02	Rice	plastid	76.89	76.21
KXG25313	Sorghum	plastid	71.33	70.09
GSMUA_Achr10P...	Banana	cytosol	54.22	64.89
Solyc01g108070.2.1	Tomato	cytosol	53.78	59.61
KRH71131	Soybean	cytosol, mitochondrion, nucleus	38.44	55.99
VIT_03s0063g00300.t01	Wine grape	plastid	55.56	55.93
Zm00001d031784_P003	Maize	plastid	72.22	55.84
KRH50291	Soybean	plastid	54.89	54.89
CDX69022	Canola	plastid	51.33	50.22
CDY68228	Canola	plastid	51.11	50.0
CDY49268	Canola	plastid	34.44	49.68
Bra011486.1-P	Field mustard	plastid	50.67	49.57
AT4G34020.1	Thale cress	plastid	49.56	47.25
TraesCS7A01G349100.1	Wheat	plastid	41.78	43.22
Bra017622.1-P	Field mustard	plastid	17.33	42.39
TraesCS3A01G142800.1	Wheat	mitochondrion	39.56	41.88
PGSC0003DMT400066294	Potato	plastid	50.22	41.47
TraesCS3A01G142700.1	Wheat	cytosol	33.56	38.13

Protein Annotations

EnsemblPlants:TraesCS4A01G376600.1	EnsemblPlantsGene:TraesCS4A01G376600	Gene3D:3.40.50.880	InterPro:Class_I_gatase-like	InterPro:DJ-1	InterPro:DJ-1/PfpI
InterPro:IPR029062	PANTHER:PTHR43444	PANTHER:PTHR43444:SF8	PFAM:PF01965	SEG:seg	SUPFAM:SSF52317
TIGR:cd03135	TIGRFAMs:TIGR01383	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr4A:+:651347391..651351632

Molecular Weight (calculated)

48253.9 Da

IEP (calculated)

8.709

GRAVY (calculated)

0.054

Length

450 amino acids

Sequence
(BLAST)

001: MLSASKPLLS PSSLIAMPIR PPPHAPTHYA PPHRRTLPLR SIARAAPSSS TAATAVSLPP SPKKVLVPIA MGTEEMEAVI LAGVLRRAGA DVTLASVEDG
101: LEIEASYGTR IIADKPIAAC ADQVFDLVAV PGGMPGSVRL RDNEILQRIM VRQAEEKRLY GAICAAPAVV LMPWGLHKGR KITCHPSFIG DLPTFRAVES
201: NVQVSGELTT SRGPGTAFQF ALSFVEQLFG PHAVEDVDST LIDAALERST EVNRVEWPFD HKPQVLIPIA NGSEEMEIIM LVDILRRANI NVVLASVDES
301: TNVVGSQRMK IVADKCILGA SDSKHDLIII PGGPAGAERL HRSTTLKKLL KEQKQAGRMY GGISYSPLIL QKQGLLEDKT VTAHPSIVDQ LTCQVIDGSK
401: VVIDGNLITG KGLGTVMDFS LAIVRKFFGH GRAKGVANGM VFDYPKSRNA

Best Arabidopsis Sequence Match ( AT4G34020.1 )
(BLAST)

001: MGSLGYSISM IASLSPTLME SRLISSMGCV SMTVAPSFSS VSVVSSSLGT TRRDRTLKLR SSMSPGMVTT LDSDVGVGSS ATTKKVLVPI GYGTEEIEAV
101: VLVDVLRRAG ADVTVASVEQ KLEVEGSSGT RLLADVLISK CADQVYDLVA LPGGMPGAVR LRDCEILEKI MKRQAEDKRL YGAISMAPAI TLLPWGLLTR
201: KRTTGHPAFF GKLPTFWAVK TNIQISGELT TSRGPGTSFQ FALSLAEQLF GETTAKSIEE FLLLRDGYQN PKNKEFNSID WSLDHTPRVL IPVANGSEAV
301: ELVSIADVLR RAKVDVTVSS VERSLRITAF QGTKIITDKL IGEAAESSYD LIILPGGHTG SERLQKSKIL KKLLREQHES GRIYGATNSS STVLHKHGLL
401: KEKRTTVYPS ESDEPMNQQM IEGAEVVIDG NVITSLGLAT VTKFSLAIVS KLFGHARARS VSEGLVHEYP RQ

Arabidopsis Description

DJ1CProtein DJ-1 homolog C [Source:UniProtKB/Swiss-Prot;Acc:Q8VY09]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.