CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
plastid 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017622.1-P	Field mustard	plastid	41.03	69.57
CDX69022	Canola	plastid	79.49	53.91
CDY68228	Canola	plastid	78.85	53.48
AT4G34020.1	Thale cress	plastid	73.72	48.73
Solyc01g108070.2.1	Tomato	cytosol	53.21	40.89
GSMUA_Achr10P...	Banana	cytosol	48.72	40.43
VIT_03s0063g00300.t01	Wine grape	plastid	56.73	39.6
KRH50291	Soybean	plastid	56.73	39.33
KRH71131	Soybean	cytosol, mitochondrion, nucleus	38.78	39.16
TraesCS7B01G246500.1	Wheat	plastid	50.32	35.12
Os05t0519600-02	Rice	plastid	50.96	35.02
TraesCS7A01G334600.1	Wheat	plastid	49.68	34.68
TraesCS7D01G342200.1	Wheat	plastid	49.68	34.68
TraesCS7A01G078400.1	Wheat	plastid	50.0	34.51
TraesCS4A01G376600.1	Wheat	plastid	49.68	34.44
TraesCS7D01G073600.1	Wheat	plastid	49.04	33.92
KXG25313	Sorghum	plastid	49.68	33.84
HORVU7Hr1G082380.12	Barley	plastid	48.08	33.26
TraesCS7A01G334700.1	Wheat	plastid	43.27	33.17
CDY24104	Canola	cytosol	38.14	30.28
CDX98521	Canola	cytosol	36.54	29.08
CDX97625	Canola	cytosol	36.54	29.08
CDY23161	Canola	cytosol	35.9	28.64
CDX95299	Canola	cytosol	35.58	28.39
CDX82455	Canola	cytosol, golgi, mitochondrion	35.58	28.32
CDX75800	Canola	cytosol, golgi, mitochondrion	35.58	28.32
CDY59398	Canola	plastid	37.82	27.57
CDY02515	Canola	plastid	36.54	26.64
Zm00001d031784_P003	Maize	plastid	49.68	26.63
PGSC0003DMT400066294	Potato	plastid	45.83	26.24
CDY25999	Canola	golgi, plastid	39.1	24.7

Protein Annotations

EnsemblPlants:CDY49268	EnsemblPlantsGene:GSBRNA2T00092682001	Gene3D:3.40.50.880	InterPro:Class_I_gatase-like	InterPro:DJ-1/PfpI	InterPro:IPR029062
PANTHER:PTHR43444	PANTHER:PTHR43444:SF8	PFAM:PF01965	ProteinID:CDY49268	ProteinID:CDY49268.1	SEG:seg
SUPFAM:SSF52317	UniParc:UPI0004EF01CF	UniProt:A0A078IJL6	MapMan:35.1	:	:

Description

BnaA03g50810DBnaA03g50810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJL6]

Coordinates

chrLK032822:-:28087..30277

Molecular Weight (calculated)

33535.0 Da

IEP (calculated)

8.241

GRAVY (calculated)

0.271

Length

312 amino acids

Sequence
(BLAST)

001: MIATLSPPST MVAPSLYSAS FISSPVLVPI GFGTEEIEVV VLVDVLHRAG AEVTLVYVEQ KLEVEGSLGT KLLADVLISK CSEQVFDLVP LPGGMSGAVR
101: LRDCVTLEKI MKRQAEDKRL YRAISMAPAI TLFPWGLLIR KKTTGHPAFF GKLPTFWAVE VVTVADVLRR AKVDVTVASV ERSLRITVSL GTKIVTDKLI
201: GEAAESSYDL IILPGGHAGS ESTNSSSTVL HKHSLLKEKR TAVYLSDTHR PVDDQMIQGA EVVIDGSVIT GMGLATVTNF SLAIVGKLFG HGRARSVSQG
301: LVHEYQLNLK AS

Best Arabidopsis Sequence Match ( AT4G34020.1 )
(BLAST)

001: MGSLGYSISM IASLSPTLME SRLISSMGCV SMTVAPSFSS VSVVSSSLGT TRRDRTLKLR SSMSPGMVTT LDSDVGVGSS ATTKKVLVPI GYGTEEIEAV
101: VLVDVLRRAG ADVTVASVEQ KLEVEGSSGT RLLADVLISK CADQVYDLVA LPGGMPGAVR LRDCEILEKI MKRQAEDKRL YGAISMAPAI TLLPWGLLTR
201: KRTTGHPAFF GKLPTFWAVK TNIQISGELT TSRGPGTSFQ FALSLAEQLF GETTAKSIEE FLLLRDGYQN PKNKEFNSID WSLDHTPRVL IPVANGSEAV
301: ELVSIADVLR RAKVDVTVSS VERSLRITAF QGTKIITDKL IGEAAESSYD LIILPGGHTG SERLQKSKIL KKLLREQHES GRIYGATNSS STVLHKHGLL
401: KEKRTTVYPS ESDEPMNQQM IEGAEVVIDG NVITSLGLAT VTKFSLAIVS KLFGHARARS VSEGLVHEYP RQ

Arabidopsis Description

DJ1CProtein DJ-1 homolog C [Source:UniProtKB/Swiss-Prot;Acc:Q8VY09]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.