CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, cytosol

Predictor Summary:

cytosol 2
mitochondrion 3
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82455	Canola	cytosol, golgi, mitochondrion	97.7	97.7
CDX98521	Canola	cytosol	86.99	86.99
CDX97625	Canola	cytosol	85.97	85.97
CDX95299	Canola	cytosol	84.69	84.91
CDY23161	Canola	cytosol	84.18	84.4
CDY24104	Canola	cytosol	77.81	77.61
CDY02515	Canola	plastid	76.53	70.09
CDY59398	Canola	plastid	76.28	69.86
CDY25999	Canola	golgi, plastid	78.32	62.15
GSMUA_Achr8P19930_001	Banana	cytosol	56.89	59.63
PGSC0003DMT400032252	Potato	cytosol, peroxisome, plastid	59.44	59.59
Solyc07g062610.2.1	Tomato	plastid	58.93	59.08
Os06t0531200-01	Rice	plastid	57.4	57.11
OQU86107	Sorghum	cytosol	45.41	56.15
KRH27320	Soybean	nucleus	58.93	53.1
KRH21993	Soybean	endoplasmic reticulum, nucleus	59.18	53.09
EER89866	Sorghum	plastid	58.67	51.92
TraesCS7A01G349100.1	Wheat	plastid	56.38	50.8
TraesCS7D01G329500.1	Wheat	golgi, plastid	55.87	50.34
Zm00001d046135_P001	Maize	plastid	56.12	50.34
TraesCS3B01G162300.1	Wheat	mitochondrion	54.08	49.88
TraesCS3D01G144800.1	Wheat	mitochondrion	54.08	49.77
Os01t0217800-01	Rice	mitochondrion	54.08	49.53
Zm00001d039363_P001	Maize	mitochondrion	53.83	49.3
TraesCS3A01G142800.1	Wheat	mitochondrion	52.81	48.71
TraesCS7B01G233600.2	Wheat	mitochondrion	55.87	46.79
TraesCS1D01G007700.1	Wheat	cytosol	50.51	42.95
TraesCS3D01G144900.1	Wheat	cytosol	42.35	42.13
Os01t0217500-01	Rice	cytosol	41.84	41.52
TraesCS3A01G142700.1	Wheat	cytosol	41.33	40.91
OQU86110	Sorghum	extracellular, plasma membrane	39.8	36.62
CDY49268	Canola	plastid	28.32	35.58
CDX69022	Canola	plastid	39.8	33.91
CDY68228	Canola	plastid	39.54	33.7
VIT_15s0024g01260.t01	Wine grape	cytosol	18.62	30.29
HORVU3Hr1G049070.10	Barley	cytosol, nucleus, plasma membrane	9.95	19.02

Protein Annotations

EnsemblPlants:CDX75800	EnsemblPlantsGene:GSBRNA2T00123753001	Gene3D:3.40.50.880	InterPro:Class_I_gatase-like	InterPro:DJ-1	InterPro:DJ-1/PfpI
InterPro:IPR029062	PANTHER:PTHR43444	PANTHER:PTHR43444:SF8	PFAM:PF01965	ProteinID:CDX75800	ProteinID:CDX75800.1
SUPFAM:SSF52317	TIGRFAMs:TIGR01383	UniParc:UPI0004EAF9B7	MapMan:35.1	:	:

Description

BnaC03g38830D

Coordinates

chrLK031805:+:795989..798502

Molecular Weight (calculated)

41865.0 Da

IEP (calculated)

6.402

GRAVY (calculated)

0.078

Length

392 amino acids

Sequence
(BLAST)

001: MASSRKKVLI PIAHGTEPLE ALAMITVLRR SGAYVTVASV ENQVGVDACH GIKMVADTLL SDITDSTFDL IMLPGGLPGG ETLKNCKPLE NMVKKQETDG
101: RLNAAICCAP ALALGTWGLL EGKKATCYPV FMEKLAATCA TASESRVEID GKIVTSRGPG TTIEFSLTLI EKLCGKQTAI DVSSILLPRP NPGEEFTFTE
201: LNQINWTFED TPQILVPIAE GSDEIEAIAV VDTLRRAKAN VVIASVGNSL EVVGSHKANL VADVLLDEIL EKSFDMIMLP GGLNGASRLS RCEKLVNMLK
301: KQAEANKPYG GICASPAYVF EPHGLLKGKK ATTHPVVSNR LSDQSHVDHR VVADGNLITS RAPGTAMECA LAIVEKFYGR EKALQLAKAT LV

Best Arabidopsis Sequence Match ( AT3G14990.1 )
(BLAST)

001: MASFTKTVLI PIAHGTEPLE AVAMITVLRR GGADVTVASV ETQVGVDACH GIKMVADTLL SDITDSVFDL IVLPGGLPGG ETLKNCKSLE NMVKKQDSDG
101: RLNAAICCAP ALALGTWGLL EGKKATGYPV FMEKLAATCA TAVESRVQID GRIVTSRGPG TTIEFSITLI EQLFGKEKAD EVSSILLLRP NPGEEFTFTE
201: LNQTNWSFED TPQILVPIAE ESEEIEAIAL VDILRRAKAN VVIAAVGNSL EVEGSRKAKL VAEVLLDEVA EKSFDLIVLP GGLNGAQRFA SCEKLVNMLR
301: KQAEANKPYG GICASPAYVF EPNGLLKGKK ATTHPVVSDK LSDKSHIEHR VVVDGNVITS RAPGTAMEFS LAIVEKFYGR EKALQLGKAT LV

Arabidopsis Description

DJ1AProtein DJ-1 homolog A [Source:UniProtKB/Swiss-Prot;Acc:Q9FPF0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.