Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KXG21735 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G53280.1 | KXG21735 | AT5G05410.1 | 18552202 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039363_P001 | Maize | mitochondrion | 94.95 | 70.33 |
| TraesCS3D01G144800.1 | Wheat | mitochondrion | 88.64 | 65.96 |
| TraesCS3B01G162300.1 | Wheat | mitochondrion | 88.33 | 65.88 |
| TraesCS3A01G142800.1 | Wheat | mitochondrion | 87.38 | 65.18 |
| Os01t0217800-01 | Rice | mitochondrion | 83.28 | 61.68 |
| HORVU3Hr1G027610.6 | Barley | cytosol, mitochondrion, plastid | 86.12 | 59.35 |
| GSMUA_Achr8P19930_001 | Banana | cytosol | 64.98 | 55.08 |
| HORVU1Hr1G001090.1 | Barley | cytosol | 72.87 | 48.84 |
| PGSC0003DMT400032252 | Potato | cytosol, peroxisome, plastid | 59.62 | 48.34 |
| TraesCS1D01G007700.1 | Wheat | cytosol | 70.03 | 48.16 |
| Solyc07g062610.2.1 | Tomato | plastid | 59.31 | 48.08 |
| Bra039666.1-P | Field mustard | cytosol | 59.31 | 47.84 |
| CDY24104 | Canola | cytosol | 58.99 | 47.58 |
| CDX95299 | Canola | cytosol | 57.1 | 46.29 |
| CDX97625 | Canola | cytosol | 56.78 | 45.92 |
| Bra027286.1-P | Field mustard | cytosol | 56.78 | 45.92 |
| AT3G14990.1 | Thale cress | cytosol | 56.47 | 45.66 |
| Bra001577.1-P | Field mustard | cytosol, golgi, mitochondrion | 56.47 | 45.66 |
| CDX82455 | Canola | cytosol, golgi, mitochondrion | 56.47 | 45.66 |
| CDX98521 | Canola | cytosol | 56.47 | 45.66 |
| VIT_19s0014g01520.t01 | Wine grape | plastid | 61.51 | 45.45 |
| CDX75800 | Canola | cytosol, golgi, mitochondrion | 56.15 | 45.41 |
| Bra033480.1-P | Field mustard | cytosol | 55.84 | 45.27 |
| CDY23161 | Canola | cytosol | 55.52 | 45.01 |
| KRH21993 | Soybean | endoplasmic reticulum, nucleus | 61.2 | 44.39 |
| CDY59398 | Canola | plastid | 59.62 | 44.16 |
| CDY02515 | Canola | plastid | 58.99 | 43.69 |
| Bra030947.1-P | Field mustard | plastid | 58.99 | 43.69 |
| KRH27320 | Soybean | nucleus | 59.62 | 43.45 |
| AT1G53280.1 | Thale cress | plastid | 59.62 | 43.15 |
| EER89866 | Sorghum | plastid | 60.25 | 43.12 |
| CDY25999 | Canola | golgi, plastid | 58.99 | 37.85 |
| OQU86110 | Sorghum | extracellular, plasma membrane | 42.9 | 31.92 |
| KXG25313 | Sorghum | plastid | 41.64 | 28.82 |
| VIT_15s0024g01260.t01 | Wine grape | cytosol | 13.88 | 18.26 |
Protein Annotations
| EnsemblPlants:OQU86107 | EnsemblPlantsGene:SORBI_3003G017700 | Gene3D:3.40.50.880 | InterPro:Class_I_gatase-like | InterPro:DJ-1 | InterPro:DJ-1/PfpI |
| InterPro:IPR029062 | PANTHER:PTHR43444 | PANTHER:PTHR43444:SF9 | PFAM:PF01965 | ProteinID:OQU86106.1 | ProteinID:OQU86107 |
| ProteinID:OQU86107.1 | ProteinID:OQU86108.1 | ProteinID:OQU86109.1 | SUPFAM:SSF52317 | TIGRFAMs:TIGR01383 | TMHMM:TMhelix |
| UniParc:UPI0009DC84EF | UniProt:A0A1W0VVD9 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:1573493..1576539
Molecular Weight (calculated)
34260.8 Da
IEP (calculated)
7.152
GRAVY (calculated)
0.007
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGSVGLRDC KALEKMVKTH AENGGLYGAI CAAPAVTLAY WGMLKGLKAT CYPSFMEKFT AEVIPVDSRV VVDRNAVTSQ GPGTAIEFGL ALVEKLYGKE
101: KMEEVAGPLY VRPQHGAEYT VEELNSAEWK CSSTPQVLVP VANGSEEIEA VNLIDVLRRA GANVIVASVE EKLQTVTRRH KFNLIADMML DEATEMQFDL
201: IVMPGGLQGA QKFASTKKLV DLLKKQAESN KPYGAICASP AHVLQPHGLL KGKKATAFPP MSHLLTDQSA CEHRVVVDGN LITSRAPGTA TEFALAIVEK
301: LFGRDKAVSI AKEMIFM
101: KMEEVAGPLY VRPQHGAEYT VEELNSAEWK CSSTPQVLVP VANGSEEIEA VNLIDVLRRA GANVIVASVE EKLQTVTRRH KFNLIADMML DEATEMQFDL
201: IVMPGGLQGA QKFASTKKLV DLLKKQAESN KPYGAICASP AHVLQPHGLL KGKKATAFPP MSHLLTDQSA CEHRVVVDGN LITSRAPGTA TEFALAIVEK
301: LFGRDKAVSI AKEMIFM
001: MASSSLCHRY FNKITVTPFF NTKKLHHYSP RRISLRVNRR SFSISATMSS STKKVLIPVA HGTEPFEAVV MIDVLRRGGA DVTVASVENQ VGVDACHGIK
101: MVADTLLSDI TDSVFDLIML PGGLPGGETL KNCKPLEKMV KKQDTDGRLN AAICCAPALA FGTWGLLEGK KATCYPVFME KLAACATAVE SRVEIDGKIV
201: TSRGPGTTME FSVTLVEQLL GKEKAVEVSG PLVMRPNPGD EYTITELNQV SWSFEGTPQI LVPIADGSEE MEAVAIIDVL KRAKANVVVA ALGNSLEVVA
301: SRKVKLVADV LLDEAEKNSY DLIVLPGGLG GAEAFASSEK LVNMLKKQAE SNKPYGAICA SPALVFEPHG LLKGKKATAF PAMCSKLTDQ SHIEHRVLVD
401: GNLITSRGPG TSLEFALAIV EKFYGREKGL QLSKATLV
101: MVADTLLSDI TDSVFDLIML PGGLPGGETL KNCKPLEKMV KKQDTDGRLN AAICCAPALA FGTWGLLEGK KATCYPVFME KLAACATAVE SRVEIDGKIV
201: TSRGPGTTME FSVTLVEQLL GKEKAVEVSG PLVMRPNPGD EYTITELNQV SWSFEGTPQI LVPIADGSEE MEAVAIIDVL KRAKANVVVA ALGNSLEVVA
301: SRKVKLVADV LLDEAEKNSY DLIVLPGGLG GAEAFASSEK LVNMLKKQAE SNKPYGAICA SPALVFEPHG LLKGKKATAF PAMCSKLTDQ SHIEHRVLVD
401: GNLITSRGPG TSLEFALAIV EKFYGREKGL QLSKATLV
Arabidopsis Description
DJ1BProtein DJ-1 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.