Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G53280.1 | CDX70151 | AT5G05410.1 | 18552202 |
| AT1G53280.1 | CDX98843 | AT5G05410.1 | 18552202 |
| AT1G53280.1 | CDY04950 | AT5G05410.1 | 18552202 |
| AT1G53280.1 | CDY52149 | AT5G05410.1 | 18552202 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039666.1-P | Field mustard | cytosol | 98.47 | 98.47 |
| CDY59398 | Canola | plastid | 93.13 | 85.51 |
| CDY02515 | Canola | plastid | 92.11 | 84.58 |
| AT1G53280.1 | Thale cress | plastid | 93.13 | 83.56 |
| CDX98521 | Canola | cytosol | 79.39 | 79.59 |
| CDX95299 | Canola | cytosol | 79.13 | 79.54 |
| CDX97625 | Canola | cytosol | 79.13 | 79.34 |
| CDY23161 | Canola | cytosol | 77.86 | 78.26 |
| CDX75800 | Canola | cytosol, golgi, mitochondrion | 77.61 | 77.81 |
| CDX82455 | Canola | cytosol, golgi, mitochondrion | 77.1 | 77.3 |
| CDY25999 | Canola | golgi, plastid | 95.93 | 76.32 |
| GSMUA_Achr8P19930_001 | Banana | cytosol | 64.63 | 67.91 |
| PGSC0003DMT400032252 | Potato | cytosol, peroxisome, plastid | 66.92 | 67.26 |
| Solyc07g062610.2.1 | Tomato | plastid | 66.16 | 66.5 |
| Os06t0531200-01 | Rice | plastid | 66.16 | 65.99 |
| KRH21993 | Soybean | endoplasmic reticulum, nucleus | 66.67 | 59.95 |
| KRH27320 | Soybean | nucleus | 66.16 | 59.77 |
| OQU86107 | Sorghum | cytosol | 47.58 | 58.99 |
| TraesCS7D01G329500.1 | Wheat | golgi, plastid | 65.14 | 58.85 |
| TraesCS7A01G349100.1 | Wheat | plastid | 64.89 | 58.62 |
| EER89866 | Sorghum | plastid | 65.9 | 58.47 |
| Zm00001d046135_P001 | Maize | plastid | 64.63 | 58.12 |
| TraesCS7B01G233600.2 | Wheat | mitochondrion | 64.38 | 54.06 |
| TraesCS3B01G162300.1 | Wheat | mitochondrion | 57.76 | 53.41 |
| TraesCS3D01G144800.1 | Wheat | mitochondrion | 57.76 | 53.29 |
| Zm00001d039363_P001 | Maize | mitochondrion | 57.51 | 52.8 |
| TraesCS3A01G142800.1 | Wheat | mitochondrion | 56.74 | 52.47 |
| Os01t0217800-01 | Rice | mitochondrion | 55.98 | 51.4 |
| TraesCS1D01G007700.1 | Wheat | cytosol | 53.69 | 45.77 |
| Os01t0217500-01 | Rice | cytosol | 45.04 | 44.81 |
| TraesCS3D01G144900.1 | Wheat | cytosol | 43.26 | 43.15 |
| TraesCS3A01G142700.1 | Wheat | cytosol | 42.49 | 42.17 |
| OQU86110 | Sorghum | extracellular, plasma membrane | 41.48 | 38.26 |
| CDY49268 | Canola | plastid | 30.28 | 38.14 |
| CDX69022 | Canola | plastid | 43.51 | 37.17 |
| CDY68228 | Canola | plastid | 43.0 | 36.74 |
| VIT_15s0024g01260.t01 | Wine grape | cytosol | 19.85 | 32.37 |
| HORVU3Hr1G049070.10 | Barley | cytosol, nucleus, plasma membrane | 8.91 | 17.07 |
Protein Annotations
| EnsemblPlants:CDY24104 | EnsemblPlantsGene:GSBRNA2T00024652001 | Gene3D:3.40.50.880 | InterPro:Class_I_gatase-like | InterPro:DJ-1 | InterPro:DJ-1/PfpI |
| InterPro:IPR029062 | PANTHER:PTHR43444 | PANTHER:PTHR43444:SF8 | PFAM:PF01965 | ProteinID:CDY24104 | ProteinID:CDY24104.1 |
| SUPFAM:SSF52317 | TIGRFAMs:TIGR01383 | UniParc:UPI0004EF0937 | UniProt:A0A078GFK3 | MapMan:35.1 | : |
Description
BnaA06g01020DBnaA06g01020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GFK3]
Coordinates
chrLK032153:+:484209..487039
Molecular Weight (calculated)
41785.9 Da
IEP (calculated)
5.528
GRAVY (calculated)
0.101
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSPTKKVL IPVAHGTEPF EAVVMIDVLR RGGADVTVAS VENQVGVDAC HGIKMVADTL LSDITDSVFD LIMLPGGLPG GETLKNCKPL ENMVKKQDAD
101: GRVNAAICCA PALALGTWGL LEGKKATCYP VFMEKLGATC AIAVESRVEI DGRIVTSRGP GTTMEFSVKL VEQLFGKEKA AEVSAPLVMR PNPGDEYTIT
201: ELNQIKWSYE NTPQILVPIA DGSEEMEAVA IIDVLRRAKA NVVVAALGNS LEVVASRKVK LVADVLLDEA EKNSYDLIVL PGGLGGAEAF ATSDKLVNML
301: KKQAESNKPY GAICASPALV FEPHGLLKGK KATAYPAMCN KLSDQSHIEH RVLVDGNLIT SRGPGTSLEF ALAIVEKFYG REKGLQLAKA TLV
101: GRVNAAICCA PALALGTWGL LEGKKATCYP VFMEKLGATC AIAVESRVEI DGRIVTSRGP GTTMEFSVKL VEQLFGKEKA AEVSAPLVMR PNPGDEYTIT
201: ELNQIKWSYE NTPQILVPIA DGSEEMEAVA IIDVLRRAKA NVVVAALGNS LEVVASRKVK LVADVLLDEA EKNSYDLIVL PGGLGGAEAF ATSDKLVNML
301: KKQAESNKPY GAICASPALV FEPHGLLKGK KATAYPAMCN KLSDQSHIEH RVLVDGNLIT SRGPGTSLEF ALAIVEKFYG REKGLQLAKA TLV
001: MASSSLCHRY FNKITVTPFF NTKKLHHYSP RRISLRVNRR SFSISATMSS STKKVLIPVA HGTEPFEAVV MIDVLRRGGA DVTVASVENQ VGVDACHGIK
101: MVADTLLSDI TDSVFDLIML PGGLPGGETL KNCKPLEKMV KKQDTDGRLN AAICCAPALA FGTWGLLEGK KATCYPVFME KLAACATAVE SRVEIDGKIV
201: TSRGPGTTME FSVTLVEQLL GKEKAVEVSG PLVMRPNPGD EYTITELNQV SWSFEGTPQI LVPIADGSEE MEAVAIIDVL KRAKANVVVA ALGNSLEVVA
301: SRKVKLVADV LLDEAEKNSY DLIVLPGGLG GAEAFASSEK LVNMLKKQAE SNKPYGAICA SPALVFEPHG LLKGKKATAF PAMCSKLTDQ SHIEHRVLVD
401: GNLITSRGPG TSLEFALAIV EKFYGREKGL QLSKATLV
101: MVADTLLSDI TDSVFDLIML PGGLPGGETL KNCKPLEKMV KKQDTDGRLN AAICCAPALA FGTWGLLEGK KATCYPVFME KLAACATAVE SRVEIDGKIV
201: TSRGPGTTME FSVTLVEQLL GKEKAVEVSG PLVMRPNPGD EYTITELNQV SWSFEGTPQI LVPIADGSEE MEAVAIIDVL KRAKANVVVA ALGNSLEVVA
301: SRKVKLVADV LLDEAEKNSY DLIVLPGGLG GAEAFASSEK LVNMLKKQAE SNKPYGAICA SPALVFEPHG LLKGKKATAF PAMCSKLTDQ SHIEHRVLVD
401: GNLITSRGPG TSLEFALAIV EKFYGREKGL QLSKATLV
Arabidopsis Description
DJ1BProtein DJ-1 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.