Factsheet for HORVU3Hr1G049070.10

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

plasma membrane 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	nucleus, plasma membrane
MultiLoc:	plasma membrane
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G060490.5
HORVU6Hr1G050500.2
HORVU6Hr1G050520.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53280.1	HORVU1Hr1G060490.5	AT5G05410.1	18552202
AT1G53280.1	HORVU6Hr1G050500.2	AT5G05410.1	18552202
AT1G53280.1	HORVU6Hr1G050520.2	AT5G05410.1	18552202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027286.1-P	Field mustard	cytosol	19.51	10.2
Bra033480.1-P	Field mustard	cytosol	19.02	9.97
CDX95299	Canola	cytosol	19.02	9.97
CDY23161	Canola	cytosol	19.02	9.97
AT3G14990.1	Thale cress	cytosol	19.02	9.95
CDX75800	Canola	cytosol, golgi, mitochondrion	19.02	9.95
CDX97625	Canola	cytosol	19.02	9.95
CDX98521	Canola	cytosol	19.02	9.95
Solyc07g062610.2.1	Tomato	plastid	18.54	9.72
PGSC0003DMT400032252	Potato	cytosol, peroxisome, plastid	18.54	9.72
Bra001577.1-P	Field mustard	cytosol, golgi, mitochondrion	18.54	9.69
CDX82455	Canola	cytosol, golgi, mitochondrion	18.54	9.69
HORVU7Hr1G082380.12	Barley	plastid	20.49	9.31
Bra039666.1-P	Field mustard	cytosol	17.56	9.16
CDY24104	Canola	cytosol	17.07	8.91
HORVU7Hr1G079640.2	Barley	plastid	18.54	8.37
KRH27320	Soybean	nucleus	17.56	8.28
HORVU3Hr1G027610.6	Barley	cytosol, mitochondrion, plastid	18.54	8.26
CDY59398	Canola	plastid	17.07	8.18
CDY02515	Canola	plastid	17.07	8.18
Bra030947.1-P	Field mustard	plastid	17.07	8.18
KRH21993	Soybean	endoplasmic reticulum, nucleus	17.07	8.01
VIT_19s0014g01520.t01	Wine grape	plastid	16.59	7.93
AT1G53280.1	Thale cress	plastid	16.59	7.76
CDY25999	Canola	golgi, plastid	17.07	7.09
HORVU1Hr1G001090.1	Barley	cytosol	15.61	6.77
HORVU3Hr1G027700.18	Barley	cytosol	11.22	5.52
VIT_15s0024g01260.t01	Wine grape	cytosol	4.88	4.15

Protein Annotations

EnsemblPlants:HORVU3Hr1G049070.10	EnsemblPlantsGene:HORVU3Hr1G049070	Gene3D:3.40.50.880	InterPro:Class_I_gatase-like	InterPro:IPR029062	PANTHER:PTHR43444
PANTHER:PTHR43444:SF8	SEG:seg	SUPFAM:SSF52317	UniParc:UPI000B47386F	UniProt:A0A287KZF8	MapMan:35.2

Description

No Description!

Coordinates

chrchr3H:+:341283972..341287009

Molecular Weight (calculated)

22703.3 Da

IEP (calculated)

6.970

GRAVY (calculated)

-0.131

Length

205 amino acids

Sequence
(BLAST)

001: MDWQLTGEDS QTLHVVTYLN TLCMWALGAW RCQGSRIRGS SPLSQLEAFG GQAEEDDLVK LGSGCIRGLH GFSLEAGTFN CCPLLSTFSS SSPTLPSSYS
101: LQAALPRSSP QGEGCLGLPP LEIAKFWRIW LKNMQRRASF MLQYVLHQLW HWELQGTCHP SCMNKLPSEV QAVESRVQID GKCVTSRGPG TTMEYSIVLV
201: QQLYG

Best Arabidopsis Sequence Match ( AT1G53280.2 )
(BLAST)

001: MASSSLCHRY FNKITVTPFF NTKKLHHYSP RRISLRVNRR SFSISATMSS STKKVLIPVA HGTEPFEAVV MIDVLRRGGA DVTVASVENQ VGVDACHGIK
101: MVADTLLSDI TDSVFDLIML PGGLPGGETL KNCKPLEKMV KKQDTDGRLN AAICCAPALA FGTWGLLEGK KATCYPVFME KLAACATAVE SRVEIDGKIV
201: TSRGPGTTME FSVTLVEQLL GKEKAVEVSG PLVMRPNPGD EYTITELNQV SWSFEGTPQI LVPIADGSEE MEAVAIIDVL KRAKANVVVA ALGNSLEVVA
301: SRKVKLVADV LLDEAEKNSY DLIVLPGGLG GAEAFASSEK LVNMLKKQAE SNKPYGAICA SPALVFEPHG LLKVRE

Arabidopsis Description

DJ1BProtein DJ-1 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.