Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra005852.1-P | |
| Bra009112.1-P | |
| Bra028759.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G53280.1 | Bra005852.1-P | AT5G05410.1 | 18552202 |
| AT1G53280.1 | Bra009112.1-P | AT5G05410.1 | 18552202 |
| AT1G53280.1 | Bra028759.1-P | AT5G05410.1 | 18552202 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24104 | Canola | cytosol | 98.47 | 98.47 |
| Bra030947.1-P | Field mustard | plastid | 92.62 | 85.05 |
| AT1G53280.1 | Thale cress | plastid | 93.38 | 83.79 |
| Bra027286.1-P | Field mustard | cytosol | 79.39 | 79.59 |
| Bra033480.1-P | Field mustard | cytosol | 77.86 | 78.26 |
| Bra001577.1-P | Field mustard | cytosol, golgi, mitochondrion | 76.84 | 77.04 |
| GSMUA_Achr8P19930_001 | Banana | cytosol | 65.9 | 69.25 |
| PGSC0003DMT400032252 | Potato | cytosol, peroxisome, plastid | 67.43 | 67.77 |
| Solyc07g062610.2.1 | Tomato | plastid | 66.67 | 67.01 |
| Os06t0531200-01 | Rice | plastid | 66.41 | 66.24 |
| KRH27320 | Soybean | nucleus | 67.18 | 60.69 |
| KRH21993 | Soybean | endoplasmic reticulum, nucleus | 67.43 | 60.64 |
| OQU86107 | Sorghum | cytosol | 47.84 | 59.31 |
| TraesCS7D01G329500.1 | Wheat | golgi, plastid | 65.39 | 59.08 |
| TraesCS7A01G349100.1 | Wheat | plastid | 65.14 | 58.85 |
| Zm00001d046135_P001 | Maize | plastid | 65.14 | 58.58 |
| EER89866 | Sorghum | plastid | 65.65 | 58.24 |
| TraesCS7B01G233600.2 | Wheat | mitochondrion | 64.63 | 54.27 |
| TraesCS3B01G162300.1 | Wheat | mitochondrion | 58.02 | 53.65 |
| TraesCS3D01G144800.1 | Wheat | mitochondrion | 58.02 | 53.52 |
| Zm00001d039363_P001 | Maize | mitochondrion | 57.76 | 53.04 |
| TraesCS3A01G142800.1 | Wheat | mitochondrion | 57.0 | 52.71 |
| Os01t0217800-01 | Rice | mitochondrion | 56.23 | 51.64 |
| TraesCS1D01G007700.1 | Wheat | cytosol | 53.94 | 45.99 |
| Os01t0217500-01 | Rice | cytosol | 45.55 | 45.32 |
| TraesCS3D01G144900.1 | Wheat | cytosol | 44.02 | 43.91 |
| TraesCS3A01G142700.1 | Wheat | cytosol | 43.51 | 43.18 |
| OQU86110 | Sorghum | extracellular, plasma membrane | 42.24 | 38.97 |
| Bra011486.1-P | Field mustard | plastid | 44.02 | 37.61 |
| Bra017622.1-P | Field mustard | plastid | 17.3 | 36.96 |
| VIT_15s0024g01260.t01 | Wine grape | cytosol | 20.36 | 33.2 |
| HORVU3Hr1G049070.10 | Barley | cytosol, nucleus, plasma membrane | 9.16 | 17.56 |
Protein Annotations
| EnsemblPlants:Bra039666.1 | EnsemblPlants:Bra039666.1-P | EnsemblPlantsGene:Bra039666 | Gene3D:3.40.50.880 | InterPro:Class_I_gatase-like | InterPro:DJ-1 |
| InterPro:DJ-1/PfpI | InterPro:IPR029062 | PANTHER:PTHR43444 | PANTHER:PTHR43444:SF8 | PFAM:PF01965 | SUPFAM:SSF52317 |
| TIGRFAMs:TIGR01383 | UniParc:UPI000253E7F4 | UniProt:M4FEZ4 | MapMan:35.1 | : | : |
Description
AT1G53280 (E=3e-209) | DJ-1 family protein
Coordinates
chrA06:+:646522..649167
Molecular Weight (calculated)
41685.7 Da
IEP (calculated)
5.328
GRAVY (calculated)
0.103
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSPTKKVL IPVAHGTEPF EAVVMIDVLR RGGADVTVAS VENQVGVDAC HGIKMVADTL LSDVTDSVFD LIMLPGGLPG GETLKNCKPL ESMVKKQDAD
101: GRLNAAICCA PALALGTWGL LEGKKATCYP VFMEKLGATC ATAVESRVEI DGRIVTSRGP GTTMEFSVTL VEQLFGKEKA AEVSAPLVMR PNPGDEYTIT
201: ELNQIKWSYE NTPQILVPIA DGSEEMEAVA IIDVLRRAKA NVVVAALGNS LEVVASRKVK LVADVLLDEA EKNSYDLIVL PGGLGGAEAF ATSDKLVNML
301: KKQAESNKPY GAICASPALV LEPHGLLKGK KATAYPAMCN KLSDQSHIEH RVLVDGNLIT SRGPGTSLEF ALAIVEKFYG REKGLQLAKA TLV
101: GRLNAAICCA PALALGTWGL LEGKKATCYP VFMEKLGATC ATAVESRVEI DGRIVTSRGP GTTMEFSVTL VEQLFGKEKA AEVSAPLVMR PNPGDEYTIT
201: ELNQIKWSYE NTPQILVPIA DGSEEMEAVA IIDVLRRAKA NVVVAALGNS LEVVASRKVK LVADVLLDEA EKNSYDLIVL PGGLGGAEAF ATSDKLVNML
301: KKQAESNKPY GAICASPALV LEPHGLLKGK KATAYPAMCN KLSDQSHIEH RVLVDGNLIT SRGPGTSLEF ALAIVEKFYG REKGLQLAKA TLV
001: MASSSLCHRY FNKITVTPFF NTKKLHHYSP RRISLRVNRR SFSISATMSS STKKVLIPVA HGTEPFEAVV MIDVLRRGGA DVTVASVENQ VGVDACHGIK
101: MVADTLLSDI TDSVFDLIML PGGLPGGETL KNCKPLEKMV KKQDTDGRLN AAICCAPALA FGTWGLLEGK KATCYPVFME KLAACATAVE SRVEIDGKIV
201: TSRGPGTTME FSVTLVEQLL GKEKAVEVSG PLVMRPNPGD EYTITELNQV SWSFEGTPQI LVPIADGSEE MEAVAIIDVL KRAKANVVVA ALGNSLEVVA
301: SRKVKLVADV LLDEAEKNSY DLIVLPGGLG GAEAFASSEK LVNMLKKQAE SNKPYGAICA SPALVFEPHG LLKGKKATAF PAMCSKLTDQ SHIEHRVLVD
401: GNLITSRGPG TSLEFALAIV EKFYGREKGL QLSKATLV
101: MVADTLLSDI TDSVFDLIML PGGLPGGETL KNCKPLEKMV KKQDTDGRLN AAICCAPALA FGTWGLLEGK KATCYPVFME KLAACATAVE SRVEIDGKIV
201: TSRGPGTTME FSVTLVEQLL GKEKAVEVSG PLVMRPNPGD EYTITELNQV SWSFEGTPQI LVPIADGSEE MEAVAIIDVL KRAKANVVVA ALGNSLEVVA
301: SRKVKLVADV LLDEAEKNSY DLIVLPGGLG GAEAFASSEK LVNMLKKQAE SNKPYGAICA SPALVFEPHG LLKGKKATAF PAMCSKLTDQ SHIEHRVLVD
401: GNLITSRGPG TSLEFALAIV EKFYGREKGL QLSKATLV
Arabidopsis Description
DJ1BProtein DJ-1 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.