CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG21735

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53280.1	KXG21735	AT5G05410.1	18552202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G144900.1	Wheat	cytosol	62.21	67.26
Os01t0217500-01	Rice	cytosol	61.5	66.33
TraesCS3A01G142700.1	Wheat	cytosol	60.8	65.4
HORVU3Hr1G027700.18	Barley	cytosol	52.35	53.48
GSMUA_Achr8P19930_001	Banana	cytosol	41.55	47.33
Solyc07g062610.2.1	Tomato	plastid	41.55	45.27
PGSC0003DMT400032252	Potato	cytosol, peroxisome, plastid	41.31	45.01
OQU86107	Sorghum	cytosol	31.92	42.9
Bra039666.1-P	Field mustard	cytosol	38.97	42.24
CDY24104	Canola	cytosol	38.26	41.48
KRH27320	Soybean	nucleus	41.31	40.46
VIT_19s0014g01520.t01	Wine grape	plastid	40.38	40.09
CDX95299	Canola	cytosol	36.62	39.9
KRH21993	Soybean	endoplasmic reticulum, nucleus	40.85	39.82
CDX75800	Canola	cytosol, golgi, mitochondrion	36.62	39.8
Bra027286.1-P	Field mustard	cytosol	36.62	39.8
CDX98521	Canola	cytosol	36.38	39.54
CDX97625	Canola	cytosol	36.38	39.54
Bra033480.1-P	Field mustard	cytosol	36.15	39.39
CDX82455	Canola	cytosol, golgi, mitochondrion	36.15	39.29
Bra001577.1-P	Field mustard	cytosol, golgi, mitochondrion	36.15	39.29
CDY23161	Canola	cytosol	35.92	39.13
AT3G14990.1	Thale cress	cytosol	35.68	38.78
CDY59398	Canola	plastid	38.5	38.32
CDY02515	Canola	plastid	38.5	38.32
Bra030947.1-P	Field mustard	plastid	38.5	38.32
EER89866	Sorghum	plastid	39.44	37.92
AT1G53280.1	Thale cress	plastid	38.26	37.21
CDY25999	Canola	golgi, plastid	38.73	33.4
KXG25313	Sorghum	plastid	33.8	31.44
VIT_15s0024g01260.t01	Wine grape	cytosol	15.73	27.8

Protein Annotations

EnsemblPlants:OQU86110	EnsemblPlantsGene:SORBI_3003G017800	EntrezGene:8081403	Gene3D:3.40.50.880	InterPro:Class_I_gatase-like	InterPro:DJ-1
InterPro:DJ-1/PfpI	InterPro:IPR029062	PANTHER:PTHR43444	PANTHER:PTHR43444:SF6	PFAM:PF01965	ProteinID:OQU86110
ProteinID:OQU86110.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52317	TIGRFAMs:TIGR01383	unigene:Sbi.11010
UniParc:UPI0009DC8E50	UniProt:A0A1W0VVG1	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:1578669..1583159

Molecular Weight (calculated)

43544.8 Da

IEP (calculated)

4.761

GRAVY (calculated)

0.492

Length

426 amino acids

Sequence
(BLAST)

001: MASLAAVKKV LVLVPITAGS EPVEAFVPIA VLRRAGADVT VAAAGAGAGL RVHAMYGVTV VADANVADCA DASYDLVALP GGVPGADNLG GCAALESIVR
101: RQALGGGLYA AICAAPPLAL ARWGLLDGVK VISLPCLVIR ALRVYTYSRY SYTCVQATAH PAFVDKFPAE VAAVDANVVV DGRVVTGRGP APAMEFALAL
201: VEQLYGKDKV DEIAKPMMVR YEPGYAFKEL NPVQWQCSGT PKVLIPVANG SDEMEVLVTV DVLRRANADV VVASAEGGDA EVVVVARHGT RIVADALLVD
301: AVAAGQQFDF VVVPGGMAGA KTLAGTEALV ALLKEHAAAG RAYGAIGAAT AEVLEPHGLL ELEGKKATTT CASMADSREC GSRVVVDGNL ATSSGPGTAM
401: EFALAVVEKL LGAEAAREVA EALLFV

Best Arabidopsis Sequence Match ( AT1G53280.1 )
(BLAST)

001: MASSSLCHRY FNKITVTPFF NTKKLHHYSP RRISLRVNRR SFSISATMSS STKKVLIPVA HGTEPFEAVV MIDVLRRGGA DVTVASVENQ VGVDACHGIK
101: MVADTLLSDI TDSVFDLIML PGGLPGGETL KNCKPLEKMV KKQDTDGRLN AAICCAPALA FGTWGLLEGK KATCYPVFME KLAACATAVE SRVEIDGKIV
201: TSRGPGTTME FSVTLVEQLL GKEKAVEVSG PLVMRPNPGD EYTITELNQV SWSFEGTPQI LVPIADGSEE MEAVAIIDVL KRAKANVVVA ALGNSLEVVA
301: SRKVKLVADV LLDEAEKNSY DLIVLPGGLG GAEAFASSEK LVNMLKKQAE SNKPYGAICA SPALVFEPHG LLKGKKATAF PAMCSKLTDQ SHIEHRVLVD
401: GNLITSRGPG TSLEFALAIV EKFYGREKGL QLSKATLV

Arabidopsis Description

DJ1BProtein DJ-1 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.