CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, cytosol

Predictor Summary:

cytosol 2
mitochondrion 3
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001577.1-P	Field mustard	cytosol, golgi, mitochondrion	99.74	99.74
CDX75800	Canola	cytosol, golgi, mitochondrion	97.7	97.7
CDX98521	Canola	cytosol	86.48	86.48
CDX97625	Canola	cytosol	85.46	85.46
CDX95299	Canola	cytosol	84.18	84.4
CDY23161	Canola	cytosol	83.67	83.89
CDY24104	Canola	cytosol	77.3	77.1
CDY02515	Canola	plastid	76.53	70.09
CDY59398	Canola	plastid	76.28	69.86
CDY25999	Canola	golgi, plastid	77.81	61.74
GSMUA_Achr8P19930_001	Banana	cytosol	56.89	59.63
PGSC0003DMT400032252	Potato	cytosol, peroxisome, plastid	59.44	59.59
Solyc07g062610.2.1	Tomato	plastid	58.93	59.08
Os06t0531200-01	Rice	plastid	57.91	57.61
OQU86107	Sorghum	cytosol	45.66	56.47
KRH27320	Soybean	nucleus	59.44	53.56
KRH21993	Soybean	endoplasmic reticulum, nucleus	59.69	53.55
EER89866	Sorghum	plastid	59.44	52.6
TraesCS7A01G349100.1	Wheat	plastid	57.14	51.49
TraesCS7D01G329500.1	Wheat	golgi, plastid	56.63	51.03
Zm00001d046135_P001	Maize	plastid	56.63	50.8
Os01t0217800-01	Rice	mitochondrion	54.59	50.0
TraesCS3B01G162300.1	Wheat	mitochondrion	54.08	49.88
TraesCS3D01G144800.1	Wheat	mitochondrion	54.08	49.77
Zm00001d039363_P001	Maize	mitochondrion	54.08	49.53
TraesCS3A01G142800.1	Wheat	mitochondrion	52.81	48.71
TraesCS7B01G233600.2	Wheat	mitochondrion	56.63	47.44
TraesCS1D01G007700.1	Wheat	cytosol	51.02	43.38
TraesCS3D01G144900.1	Wheat	cytosol	42.09	41.88
Os01t0217500-01	Rice	cytosol	41.84	41.52
TraesCS3A01G142700.1	Wheat	cytosol	41.07	40.66
OQU86110	Sorghum	extracellular, plasma membrane	39.29	36.15
CDY49268	Canola	plastid	28.32	35.58
CDX69022	Canola	plastid	40.05	34.13
CDY68228	Canola	plastid	39.8	33.91
VIT_15s0024g01260.t01	Wine grape	cytosol	18.62	30.29
HORVU3Hr1G049070.10	Barley	cytosol, nucleus, plasma membrane	9.69	18.54

Protein Annotations

EnsemblPlants:CDX82455	EnsemblPlantsGene:GSBRNA2T00137593001	Gene3D:3.40.50.880	InterPro:Class_I_gatase-like	InterPro:DJ-1	InterPro:DJ-1/PfpI
InterPro:IPR029062	PANTHER:PTHR43444	PANTHER:PTHR43444:SF8	PFAM:PF01965	ProteinID:CDX82455	ProteinID:CDX82455.1
SEG:seg	SUPFAM:SSF52317	TIGRFAMs:TIGR01383	UniParc:UPI0004EE2C6A	MapMan:35.1	:

Description

BnaA03g33660D

Coordinates

chrLK031828:-:1363247..1365743

Molecular Weight (calculated)

41892.0 Da

IEP (calculated)

6.621

GRAVY (calculated)

0.074

Length

392 amino acids

Sequence
(BLAST)

001: MASSRKKVLI PIAHGTEPLE ALAMITVLRR SGAYVTVASV ENQVGVDACH GIKMVADTLL SDITNSTFDL IMLPGGLPGG ETLKNCKPLE NMVKKQETDG
101: RLNAAICCAP ALALGTWGLL EGKKATCYPV FMEKLAATCG TASESRVEID GKIVTSRGPG TTIEFSLTLI EKLCGKQTAV DVSSILLPRP NPGEEFTFTE
201: LNQINWTFED TPQILVPIAE GSDEIEAISV VDILRRAKAN VVIASVSNSL EVVGSHKANL VADVLLDEVL EKSFDMIMLP GGLNGASRLS RSEKLVNMLK
301: KQAEANKPYG GICASPAYVF EPHGLLKGKK ATTHPVVSNR LSDQSHVDHR VVVDGNLITS RAPGTAMECA LAIVEKFYGR EKALQLAKAT LV

Best Arabidopsis Sequence Match ( AT1G53280.1 )
(BLAST)

001: MASSSLCHRY FNKITVTPFF NTKKLHHYSP RRISLRVNRR SFSISATMSS STKKVLIPVA HGTEPFEAVV MIDVLRRGGA DVTVASVENQ VGVDACHGIK
101: MVADTLLSDI TDSVFDLIML PGGLPGGETL KNCKPLEKMV KKQDTDGRLN AAICCAPALA FGTWGLLEGK KATCYPVFME KLAACATAVE SRVEIDGKIV
201: TSRGPGTTME FSVTLVEQLL GKEKAVEVSG PLVMRPNPGD EYTITELNQV SWSFEGTPQI LVPIADGSEE MEAVAIIDVL KRAKANVVVA ALGNSLEVVA
301: SRKVKLVADV LLDEAEKNSY DLIVLPGGLG GAEAFASSEK LVNMLKKQAE SNKPYGAICA SPALVFEPHG LLKGKKATAF PAMCSKLTDQ SHIEHRVLVD
401: GNLITSRGPG TSLEFALAIV EKFYGREKGL QLSKATLV

Arabidopsis Description

DJ1BProtein DJ-1 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.