Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS1A01G221900.1 | |
| TraesCS1B01G235100.2 | |
| TraesCS1D01G223600.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G53280.1 | TraesCS1A01G221900.1 | AT5G05410.1 | 18552202 |
| AT1G53280.1 | TraesCS1B01G235100.2 | AT5G05410.1 | 18552202 |
| AT1G53280.1 | TraesCS1D01G223600.2 | AT5G05410.1 | 18552202 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G144900.1 | Wheat | cytosol | 91.16 | 91.62 |
| Os01t0217500-01 | Rice | cytosol | 70.96 | 71.14 |
| HORVU3Hr1G027700.18 | Barley | cytosol | 73.99 | 70.26 |
| OQU86110 | Sorghum | extracellular, plasma membrane | 65.4 | 60.8 |
| GSMUA_Achr8P19930_001 | Banana | cytosol | 45.45 | 48.13 |
| Solyc07g062610.2.1 | Tomato | plastid | 46.97 | 47.57 |
| PGSC0003DMT400032252 | Potato | cytosol, peroxisome, plastid | 46.72 | 47.31 |
| TraesCS3A01G142800.1 | Wheat | mitochondrion | 48.48 | 45.18 |
| CDX95299 | Canola | cytosol | 43.18 | 43.73 |
| Bra039666.1-P | Field mustard | cytosol | 43.18 | 43.51 |
| Bra033480.1-P | Field mustard | cytosol | 42.93 | 43.48 |
| TraesCS7A01G349100.1 | Wheat | plastid | 47.73 | 43.45 |
| CDY23161 | Canola | cytosol | 42.68 | 43.22 |
| CDY24104 | Canola | cytosol | 42.17 | 42.49 |
| Bra027286.1-P | Field mustard | cytosol | 41.92 | 42.35 |
| VIT_19s0014g01520.t01 | Wine grape | plastid | 45.71 | 42.19 |
| CDX98521 | Canola | cytosol | 41.67 | 42.09 |
| CDX97625 | Canola | cytosol | 41.67 | 42.09 |
| AT3G14990.1 | Thale cress | cytosol | 41.67 | 42.09 |
| CDX75800 | Canola | cytosol, golgi, mitochondrion | 40.91 | 41.33 |
| Bra001577.1-P | Field mustard | cytosol, golgi, mitochondrion | 40.91 | 41.33 |
| CDX82455 | Canola | cytosol, golgi, mitochondrion | 40.66 | 41.07 |
| KRH21993 | Soybean | endoplasmic reticulum, nucleus | 45.2 | 40.96 |
| KRH27320 | Soybean | nucleus | 44.95 | 40.92 |
| CDY59398 | Canola | plastid | 42.93 | 39.72 |
| CDY02515 | Canola | plastid | 42.68 | 39.49 |
| Bra030947.1-P | Field mustard | plastid | 42.68 | 39.49 |
| AT1G53280.1 | Thale cress | plastid | 42.68 | 38.58 |
| TraesCS7A01G334700.1 | Wheat | plastid | 37.37 | 36.36 |
| TraesCS7A01G334600.1 | Wheat | plastid | 39.14 | 34.68 |
| CDY25999 | Canola | golgi, plastid | 42.42 | 34.01 |
| TraesCS7A01G078400.1 | Wheat | plastid | 38.38 | 33.63 |
| TraesCS4A01G376600.1 | Wheat | plastid | 38.13 | 33.56 |
| VIT_15s0024g01260.t01 | Wine grape | cytosol | 18.18 | 29.88 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G142700.1 | EnsemblPlantsGene:TraesCS3A01G142700 | Gene3D:3.40.50.880 | InterPro:Class_I_gatase-like | InterPro:DJ-1 | InterPro:DJ-1/PfpI |
| InterPro:IPR029062 | PANTHER:PTHR43444 | PANTHER:PTHR43444:SF6 | PFAM:PF01965 | SEG:seg | SUPFAM:SSF52317 |
| TIGR:cd03135 | TIGRFAMs:TIGR01383 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr3A:+:123045710..123053725
Molecular Weight (calculated)
41287.4 Da
IEP (calculated)
5.040
GRAVY (calculated)
0.259
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSPSPKKK QVLLPIVAGT EPIEASIPID ILRRAGADVT VASAGDALLV EIMYGVKIMA DELLADCAAA SYDLIVLPGG VPGAVNLGGS ATLESIVRKH
101: AEKGGLYAAI CAAPPLALAS WGLLNGHKAT GHPWFVEKFP PEVTAVDANV VVDSNAVTGT GPATSMEFAL ALVEQLYGKE KVEQIAKPML VRYECGYSMK
201: EVNSVEWHCS GTPKVLLPLA NGIEEMEAII LVDALRRAKA DVVVASIEGG VEITARYGTR IVADVMLGEA ADRAPFDLII VPGGMPGAKT LGGCEQLVAL
301: LKKQAEANRP YGAIGAATAH VLEPHGLLKG RKATTCASMA GLLTDGSECE NRVVVDGNVI TSRSPGTAME YAVAVVEKML GRDEARRLAE GLLFLG
101: AEKGGLYAAI CAAPPLALAS WGLLNGHKAT GHPWFVEKFP PEVTAVDANV VVDSNAVTGT GPATSMEFAL ALVEQLYGKE KVEQIAKPML VRYECGYSMK
201: EVNSVEWHCS GTPKVLLPLA NGIEEMEAII LVDALRRAKA DVVVASIEGG VEITARYGTR IVADVMLGEA ADRAPFDLII VPGGMPGAKT LGGCEQLVAL
301: LKKQAEANRP YGAIGAATAH VLEPHGLLKG RKATTCASMA GLLTDGSECE NRVVVDGNVI TSRSPGTAME YAVAVVEKML GRDEARRLAE GLLFLG
001: MASSSLCHRY FNKITVTPFF NTKKLHHYSP RRISLRVNRR SFSISATMSS STKKVLIPVA HGTEPFEAVV MIDVLRRGGA DVTVASVENQ VGVDACHGIK
101: MVADTLLSDI TDSVFDLIML PGGLPGGETL KNCKPLEKMV KKQDTDGRLN AAICCAPALA FGTWGLLEGK KATCYPVFME KLAACATAVE SRVEIDGKIV
201: TSRGPGTTME FSVTLVEQLL GKEKAVEVSG PLVMRPNPGD EYTITELNQV SWSFEGTPQI LVPIADGSEE MEAVAIIDVL KRAKANVVVA ALGNSLEVVA
301: SRKVKLVADV LLDEAEKNSY DLIVLPGGLG GAEAFASSEK LVNMLKKQAE SNKPYGAICA SPALVFEPHG LLKGKKATAF PAMCSKLTDQ SHIEHRVLVD
401: GNLITSRGPG TSLEFALAIV EKFYGREKGL QLSKATLV
101: MVADTLLSDI TDSVFDLIML PGGLPGGETL KNCKPLEKMV KKQDTDGRLN AAICCAPALA FGTWGLLEGK KATCYPVFME KLAACATAVE SRVEIDGKIV
201: TSRGPGTTME FSVTLVEQLL GKEKAVEVSG PLVMRPNPGD EYTITELNQV SWSFEGTPQI LVPIADGSEE MEAVAIIDVL KRAKANVVVA ALGNSLEVVA
301: SRKVKLVADV LLDEAEKNSY DLIVLPGGLG GAEAFASSEK LVNMLKKQAE SNKPYGAICA SPALVFEPHG LLKGKKATAF PAMCSKLTDQ SHIEHRVLVD
401: GNLITSRGPG TSLEFALAIV EKFYGREKGL QLSKATLV
Arabidopsis Description
DJ1BProtein DJ-1 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.