Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS1A01G221900.1 | |
| TraesCS1B01G235100.2 | |
| TraesCS1D01G223600.2 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G53280.1 | TraesCS1A01G221900.1 | AT5G05410.1 | 18552202 |
| AT1G53280.1 | TraesCS1B01G235100.2 | AT5G05410.1 | 18552202 |
| AT1G53280.1 | TraesCS1D01G223600.2 | AT5G05410.1 | 18552202 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G142700.1 | Wheat | cytosol | 91.62 | 91.16 |
| HORVU3Hr1G027700.18 | Barley | cytosol | 76.9 | 72.66 |
| Os01t0217500-01 | Rice | cytosol | 69.29 | 69.11 |
| OQU86110 | Sorghum | extracellular, plasma membrane | 67.26 | 62.21 |
| Solyc07g062610.2.1 | Tomato | plastid | 47.72 | 48.08 |
| PGSC0003DMT400032252 | Potato | cytosol, peroxisome, plastid | 47.46 | 47.83 |
| GSMUA_Achr8P19930_001 | Banana | cytosol | 44.42 | 46.79 |
| TraesCS3D01G144800.1 | Wheat | mitochondrion | 49.49 | 45.77 |
| CDX95299 | Canola | cytosol | 43.91 | 44.25 |
| Bra039666.1-P | Field mustard | cytosol | 43.91 | 44.02 |
| Bra033480.1-P | Field mustard | cytosol | 43.65 | 43.99 |
| CDY23161 | Canola | cytosol | 43.4 | 43.73 |
| CDY24104 | Canola | cytosol | 43.15 | 43.26 |
| Bra027286.1-P | Field mustard | cytosol | 42.89 | 43.11 |
| CDX97625 | Canola | cytosol | 42.64 | 42.86 |
| CDX98521 | Canola | cytosol | 42.64 | 42.86 |
| TraesCS7D01G329500.1 | Wheat | golgi, plastid | 47.21 | 42.76 |
| VIT_19s0014g01520.t01 | Wine grape | plastid | 46.19 | 42.42 |
| AT3G14990.1 | Thale cress | cytosol | 42.13 | 42.35 |
| CDX75800 | Canola | cytosol, golgi, mitochondrion | 42.13 | 42.35 |
| Bra001577.1-P | Field mustard | cytosol, golgi, mitochondrion | 42.13 | 42.35 |
| CDX82455 | Canola | cytosol, golgi, mitochondrion | 41.88 | 42.09 |
| KRH21993 | Soybean | endoplasmic reticulum, nucleus | 45.43 | 40.96 |
| KRH27320 | Soybean | nucleus | 45.18 | 40.92 |
| CDY59398 | Canola | plastid | 43.65 | 40.19 |
| TraesCS1D01G007700.1 | Wheat | cytosol | 46.95 | 40.13 |
| CDY02515 | Canola | plastid | 43.4 | 39.95 |
| Bra030947.1-P | Field mustard | plastid | 43.4 | 39.95 |
| AT1G53280.1 | Thale cress | plastid | 43.91 | 39.5 |
| CDY25999 | Canola | golgi, plastid | 43.15 | 34.41 |
| TraesCS7D01G342200.1 | Wheat | plastid | 37.82 | 33.33 |
| TraesCS7D01G073600.1 | Wheat | plastid | 37.82 | 33.04 |
| VIT_15s0024g01260.t01 | Wine grape | cytosol | 18.02 | 29.46 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G144900.1 | EnsemblPlantsGene:TraesCS3D01G144900 | Gene3D:3.40.50.880 | InterPro:Class_I_gatase-like | InterPro:DJ-1 | InterPro:DJ-1/PfpI |
| InterPro:IPR029062 | PANTHER:PTHR43444 | PANTHER:PTHR43444:SF6 | PFAM:PF01965 | SEG:seg | SUPFAM:SSF52317 |
| TIGR:cd03135 | TIGRFAMs:TIGR01383 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr3D:-:108416639..108430715
Molecular Weight (calculated)
40953.0 Da
IEP (calculated)
5.032
GRAVY (calculated)
0.274
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSPSPKKV LLPIVAGTEP IEASIPIDIL RRAGANVTVA SAGDALLVEI MYGVKILADE LLVDCAAASY DLIVLPGGVP GAANLGGRAT LEGIVRKHVE
101: KGGLFAAICA APPLALASWG LLDGHKATGH PWFVEKFPPK VTAVDANVVV DGNAVTGTGP ATSMEFAMAL VEQLYGKEKV EQIAKPMLVR YEGGYSMKEL
201: NSVEWHCSGT PKVLLPVANG IEEMEAIILV DALRRANADV VVASAEDGVV VTARYGTRIV ADVMLDEAAD RAPFDLIIVP GGMPGAKTLG GCEQLVALLK
301: KQAEANRPYG AIGAATAHVL EPHGLLKGKK ATTCASMAGL LADGGECENR VVVDGNVITS RSPGTAMEYA AAVVEKMMGR DEARRLAEGL LFLS
101: KGGLFAAICA APPLALASWG LLDGHKATGH PWFVEKFPPK VTAVDANVVV DGNAVTGTGP ATSMEFAMAL VEQLYGKEKV EQIAKPMLVR YEGGYSMKEL
201: NSVEWHCSGT PKVLLPVANG IEEMEAIILV DALRRANADV VVASAEDGVV VTARYGTRIV ADVMLDEAAD RAPFDLIIVP GGMPGAKTLG GCEQLVALLK
301: KQAEANRPYG AIGAATAHVL EPHGLLKGKK ATTCASMAGL LADGGECENR VVVDGNVITS RSPGTAMEYA AAVVEKMMGR DEARRLAEGL LFLS
001: MASSSLCHRY FNKITVTPFF NTKKLHHYSP RRISLRVNRR SFSISATMSS STKKVLIPVA HGTEPFEAVV MIDVLRRGGA DVTVASVENQ VGVDACHGIK
101: MVADTLLSDI TDSVFDLIML PGGLPGGETL KNCKPLEKMV KKQDTDGRLN AAICCAPALA FGTWGLLEGK KATCYPVFME KLAACATAVE SRVEIDGKIV
201: TSRGPGTTME FSVTLVEQLL GKEKAVEVSG PLVMRPNPGD EYTITELNQV SWSFEGTPQI LVPIADGSEE MEAVAIIDVL KRAKANVVVA ALGNSLEVVA
301: SRKVKLVADV LLDEAEKNSY DLIVLPGGLG GAEAFASSEK LVNMLKKQAE SNKPYGAICA SPALVFEPHG LLKGKKATAF PAMCSKLTDQ SHIEHRVLVD
401: GNLITSRGPG TSLEFALAIV EKFYGREKGL QLSKATLV
101: MVADTLLSDI TDSVFDLIML PGGLPGGETL KNCKPLEKMV KKQDTDGRLN AAICCAPALA FGTWGLLEGK KATCYPVFME KLAACATAVE SRVEIDGKIV
201: TSRGPGTTME FSVTLVEQLL GKEKAVEVSG PLVMRPNPGD EYTITELNQV SWSFEGTPQI LVPIADGSEE MEAVAIIDVL KRAKANVVVA ALGNSLEVVA
301: SRKVKLVADV LLDEAEKNSY DLIVLPGGLG GAEAFASSEK LVNMLKKQAE SNKPYGAICA SPALVFEPHG LLKGKKATAF PAMCSKLTDQ SHIEHRVLVD
401: GNLITSRGPG TSLEFALAIV EKFYGREKGL QLSKATLV
Arabidopsis Description
DJ1BProtein DJ-1 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.