Factsheet for TraesCS1D01G007700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G221900.1
TraesCS1B01G235100.2
TraesCS1D01G223600.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53280.1	TraesCS1A01G221900.1	AT5G05410.1	18552202
AT1G53280.1	TraesCS1B01G235100.2	AT5G05410.1	18552202
AT1G53280.1	TraesCS1D01G223600.2	AT5G05410.1	18552202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G001090.1	Barley	cytosol	82.0	79.92
OQU86107	Sorghum	cytosol	48.16	70.03
TraesCS3D01G144800.1	Wheat	mitochondrion	61.82	66.9
Os01t0217800-01	Rice	mitochondrion	61.82	66.59
Zm00001d039363_P001	Maize	mitochondrion	59.44	64.02
GSMUA_Achr8P19930_001	Banana	cytosol	45.77	56.42
Solyc07g062610.2.1	Tomato	plastid	46.2	54.48
PGSC0003DMT400032252	Potato	cytosol, peroxisome, plastid	46.2	54.48
Bra039666.1-P	Field mustard	cytosol	45.99	53.94
CDY24104	Canola	cytosol	45.77	53.69
CDX95299	Canola	cytosol	43.82	51.66
Bra027286.1-P	Field mustard	cytosol	43.82	51.53
CDX97625	Canola	cytosol	43.82	51.53
CDX98521	Canola	cytosol	43.6	51.28
CDX82455	Canola	cytosol, golgi, mitochondrion	43.38	51.02
CDY59398	Canola	plastid	47.29	50.93
AT3G14990.1	Thale cress	cytosol	43.17	50.77
Bra001577.1-P	Field mustard	cytosol, golgi, mitochondrion	43.17	50.77
Bra033480.1-P	Field mustard	cytosol	42.95	50.64
CDX75800	Canola	cytosol, golgi, mitochondrion	42.95	50.51
Bra030947.1-P	Field mustard	plastid	46.85	50.47
CDY02515	Canola	plastid	46.85	50.47
CDY23161	Canola	cytosol	42.73	50.38
VIT_19s0014g01520.t01	Wine grape	plastid	46.64	50.12
KRH27320	Soybean	nucleus	47.29	50.11
AT1G53280.1	Thale cress	plastid	46.85	49.32
KRH21993	Soybean	endoplasmic reticulum, nucleus	46.64	49.2
TraesCS7D01G329500.1	Wheat	golgi, plastid	46.42	49.2
TraesCS3D01G144900.1	Wheat	cytosol	40.13	46.95
CDY25999	Canola	golgi, plastid	46.64	43.52
TraesCS7D01G073600.1	Wheat	plastid	35.36	36.14
TraesCS7D01G342200.1	Wheat	plastid	34.92	36.02
VIT_15s0024g01260.t01	Wine grape	cytosol	14.32	27.39

Protein Annotations

EnsemblPlants:TraesCS1D01G007700.1	EnsemblPlantsGene:TraesCS1D01G007700	Gene3D:3.40.50.880	InterPro:Class_I_gatase-like	InterPro:DJ-1	InterPro:DJ-1/PfpI
InterPro:IPR029062	PANTHER:PTHR43444	PANTHER:PTHR43444:SF9	PFAM:PF01965	SEG:seg	SUPFAM:SSF52317
TIGR:cd03135	TIGRFAMs:TIGR01383	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr1D:+:3954622..3958489

Molecular Weight (calculated)

48777.2 Da

IEP (calculated)

6.702

GRAVY (calculated)

0.085

Length

461 amino acids

Sequence
(BLAST)

001: MAAVAPAPED RVAADAAKLV AAHVEDDEQR GGCCCCCGAA ASSLARRATS WCRRKLVSRP VVRGGPIEPA SKRVLVAVAA GTEPLEAAAA ADILDRAGAR
101: VTVGTASEGL VVEAGHGVRF AADGRLAGLE AEEFDLIVLP GGMKGSANLG DCKQLEKMVR KHTQSGRLCA AIGAAPAMVL ARWGVLKGFT ATCHPALLGR
201: LGDDDGVIAV DDRVVKDRNV VTSQGVGTAI EFALELVEQL YGELKAHEVA GPLYMRPQQG VKYSIQEYNQ IQWKCTGTPR VLVPVANGSE EMEALNLIDV
301: LRRAGARVTV ASVEDTPRIV TRHYKLNLIT DVMLEQAAEM EFDLIVMPGG LPGALKFTSS EKLVGMLKKQ AESGRPYGAI CASPAYVLEP HGLLKGKKAT
401: SFPPMAHLLT DQSACEYRVV VDGNLITSRA PGTATEFALA IVEKLFGEEK AVALAKELVF M

Best Arabidopsis Sequence Match ( AT1G53280.1 )
(BLAST)

001: MASSSLCHRY FNKITVTPFF NTKKLHHYSP RRISLRVNRR SFSISATMSS STKKVLIPVA HGTEPFEAVV MIDVLRRGGA DVTVASVENQ VGVDACHGIK
101: MVADTLLSDI TDSVFDLIML PGGLPGGETL KNCKPLEKMV KKQDTDGRLN AAICCAPALA FGTWGLLEGK KATCYPVFME KLAACATAVE SRVEIDGKIV
201: TSRGPGTTME FSVTLVEQLL GKEKAVEVSG PLVMRPNPGD EYTITELNQV SWSFEGTPQI LVPIADGSEE MEAVAIIDVL KRAKANVVVA ALGNSLEVVA
301: SRKVKLVADV LLDEAEKNSY DLIVLPGGLG GAEAFASSEK LVNMLKKQAE SNKPYGAICA SPALVFEPHG LLKGKKATAF PAMCSKLTDQ SHIEHRVLVD
401: GNLITSRGPG TSLEFALAIV EKFYGREKGL QLSKATLV

Arabidopsis Description

DJ1BProtein DJ-1 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.