Factsheet for VIT_19s0014g01520.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P19930_001	Banana	cytosol	66.2	75.94
Os06t0531200-01	Rice	plastid	64.8	70.56
KRH21993	Soybean	endoplasmic reticulum, nucleus	69.7	68.42
KRH27320	Soybean	nucleus	67.6	66.67
TraesCS7D01G329500.1	Wheat	golgi, plastid	65.27	64.37
TraesCS7A01G349100.1	Wheat	plastid	65.27	64.37
EER89866	Sorghum	plastid	66.2	64.11
Zm00001d046135_P001	Maize	plastid	64.8	63.62
OQU86107	Sorghum	cytosol	45.45	61.51
TraesCS7B01G233600.2	Wheat	mitochondrion	65.5	60.04
TraesCS3B01G162300.1	Wheat	mitochondrion	55.48	56.0
TraesCS3D01G144800.1	Wheat	mitochondrion	55.48	55.87
Zm00001d039363_P001	Maize	mitochondrion	55.24	55.37
TraesCS3A01G142800.1	Wheat	mitochondrion	54.55	55.06
Os01t0217800-01	Rice	mitochondrion	53.85	53.97
Os01t0217500-01	Rice	cytosol	43.59	47.34
TraesCS1D01G007700.1	Wheat	cytosol	50.12	46.64
TraesCS3D01G144900.1	Wheat	cytosol	42.42	46.19
TraesCS3A01G142700.1	Wheat	cytosol	42.19	45.71
VIT_03s0063g00300.t01	Wine grape	plastid	46.15	44.3
VIT_15s0024g01260.t01	Wine grape	cytosol	23.78	42.32
OQU86110	Sorghum	extracellular, plasma membrane	40.09	40.38
HORVU3Hr1G049070.10	Barley	cytosol, nucleus, plasma membrane	7.93	16.59

Protein Annotations

EntrezGene:100253735	wikigene:100253735	Gene3D:3.40.50.880	MapMan:35.1	ProteinID:CCB46266	ProteinID:CCB46266.1
InterPro:Class_I_gatase-like	InterPro:DJ-1	InterPro:DJ-1/PfpI	UniProt:F6H2P8	EMBL:FN595229	InterPro:IPR029062
EntrezGene:LOC100253735	wikigene:LOC100253735	PFAM:PF01965	PANTHER:PTHR43444	PANTHER:PTHR43444:SF8	SUPFAM:SSF52317
TIGR:TC63730	TIGRFAMs:TIGR01383	UniParc:UPI0002109541	ArrayExpress:VIT_19s0014g01520	EnsemblPlantsGene:VIT_19s0014g01520	EnsemblPlants:VIT_19s0014g01520.t01
unigene:Vvi.1725	RefSeq:XP_002283063	RefSeq:XP_002283063.1	RefSeq:XP_010644129.1	SEG:seg	:

Description

No Description!

Coordinates

chr19:+:1617113..1624250

Molecular Weight (calculated)

45670.9 Da

IEP (calculated)

7.360

GRAVY (calculated)

0.172

Length

429 amino acids

Sequence
(BLAST)

001: MALRHLTPLS PLSPFTRIPP RRCFTQKPFS LSVSASMGSS SRKVLVPIAH GSEPMEAVII IDVLRRAGAD VTVASVEKRL QVDACHGVKI VADALISDCA
101: DTGFDLISLP GGMPGAATLR DCGMLESMVK KHAADGQLYA GICAAPAVAL GSWGLMKGLK ATCYPSFMEQ LSSTATTVES RVQQDGKVVT SRGPGTTMEF
201: SVSLVEQLYG KEKANEVSGP LVMCSNLGDK FIMAELNPID WKCDNPQILV PIANGTEEME AVIIIDFLRR AKANVVVASV EDKLEIVASR KVKLVADVLL
301: DEAVKLSYDL IVLPGGLGGA QAFASSEKLV NLLKNQRESN KPYGAICASP ALVLEPHGLL KGKKATAFPA LCSKLSDQSE IENRVLVDGN LITSRGPGTS
401: MEFALAIIEK FFGHGKALEL AKVMLFSSQ

Best Arabidopsis Sequence Match ( AT1G53280.1 )
(BLAST)

001: MASSSLCHRY FNKITVTPFF NTKKLHHYSP RRISLRVNRR SFSISATMSS STKKVLIPVA HGTEPFEAVV MIDVLRRGGA DVTVASVENQ VGVDACHGIK
101: MVADTLLSDI TDSVFDLIML PGGLPGGETL KNCKPLEKMV KKQDTDGRLN AAICCAPALA FGTWGLLEGK KATCYPVFME KLAACATAVE SRVEIDGKIV
201: TSRGPGTTME FSVTLVEQLL GKEKAVEVSG PLVMRPNPGD EYTITELNQV SWSFEGTPQI LVPIADGSEE MEAVAIIDVL KRAKANVVVA ALGNSLEVVA
301: SRKVKLVADV LLDEAEKNSY DLIVLPGGLG GAEAFASSEK LVNMLKKQAE SNKPYGAICA SPALVFEPHG LLKGKKATAF PAMCSKLTDQ SHIEHRVLVD
401: GNLITSRGPG TSLEFALAIV EKFYGREKGL QLSKATLV

Arabidopsis Description

DJ1BProtein DJ-1 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.