Factsheet for VIT_03s0063g00300.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g108070.2.1	Tomato	cytosol	67.11	73.89
GSMUA_Achr10P...	Banana	cytosol	59.28	70.48
KRH71131	Soybean	cytosol, mitochondrion, nucleus	46.98	67.96
KRH50291	Soybean	plastid	64.88	64.44
CDY68228	Canola	plastid	59.51	57.83
CDX69022	Canola	plastid	59.28	57.61
CDY49268	Canola	plastid	39.6	56.73
Bra011486.1-P	Field mustard	plastid	58.17	56.52
Os05t0519600-02	Rice	plastid	56.82	55.95
TraesCS7A01G334600.1	Wheat	plastid	55.93	55.93
AT4G34020.1	Thale cress	plastid	58.84	55.72
KXG25313	Sorghum	plastid	57.05	55.68
TraesCS4A01G376600.1	Wheat	plastid	55.93	55.56
TraesCS7A01G334700.1	Wheat	plastid	50.56	55.53
TraesCS7B01G246500.1	Wheat	plastid	55.48	55.48
TraesCS7D01G342200.1	Wheat	plastid	55.48	55.48
TraesCS7D01G073600.1	Wheat	plastid	55.7	55.21
TraesCS7A01G078400.1	Wheat	plastid	55.48	54.87
HORVU7Hr1G082380.12	Barley	plastid	54.59	54.1
Bra017622.1-P	Field mustard	plastid	21.03	51.09
PGSC0003DMT400066294	Potato	plastid	59.73	48.99
VIT_19s0014g01520.t01	Wine grape	plastid	44.3	46.15
Zm00001d031784_P003	Maize	plastid	56.38	43.3
VIT_15s0024g01260.t01	Wine grape	cytosol	15.66	29.05

Protein Annotations

EntrezGene:100258951	wikigene:100258951	Gene3D:3.40.50.880	MapMan:35.1	ProteinID:CBI32399	ProteinID:CBI32399.3
InterPro:Class_I_gatase-like	UniProt:D7TPH6	InterPro:DJ-1	InterPro:DJ-1/PfpI	EMBL:FN596006	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536
GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	InterPro:IPR029062	EntrezGene:LOC100258951	wikigene:LOC100258951
PFAM:PF01965	PANTHER:PTHR43444	PANTHER:PTHR43444:SF8	SUPFAM:SSF52317	TIGRFAMs:TIGR01383	UniParc:UPI0001982DA7
ArrayExpress:VIT_03s0063g00300	EnsemblPlantsGene:VIT_03s0063g00300	EnsemblPlants:VIT_03s0063g00300.t01	unigene:Vvi.12844	RefSeq:XP_002282255	RefSeq:XP_002282255.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3:+:3882126..3887012

Molecular Weight (calculated)

48030.5 Da

IEP (calculated)

9.645

GRAVY (calculated)

0.055

Length

447 amino acids

Sequence
(BLAST)

001: MKCLSLSPLL SPPSLSFSSS IKTPFLVALT STPSKTHTPK RSSKSAKTLF PTTTTSLPPK KVLVPIGYGT EEMEAVILVD VLRRAGANVV VASVEPQLEI
101: EASSGTRLVA DTSISTCSDE IFDLIALPGG MPGSARLRDS EILRKITSKH AEEKRLYGAI CAAPAITLQP WGLLRRKQMT CHPAFMDKLP TFRAVKSNLQ
201: VSGELTTSRG PGTAFEFALA LVDQLFGESV AKEVGELLLM RTAEDNHKKE EFNEVEWSVD HSPHVLVPVA NGSEEIEVVT VVDILRRAKV DVVVASVEKS
301: LQILASRGIK LIADKSIDNA AESIYDLIIL PGGIAGAERL HKSKVLKKML KEQGSAGRIY GAICSSPTVL HRQGLLKGKR ATAHPSVASK LTNEVVEGAR
401: VVIDGKLITS RGLATAIEFA LAIVSKLFSH ARARSVAEGL VFEYPKS

Best Arabidopsis Sequence Match ( AT4G34020.1 )
(BLAST)

001: MGSLGYSISM IASLSPTLME SRLISSMGCV SMTVAPSFSS VSVVSSSLGT TRRDRTLKLR SSMSPGMVTT LDSDVGVGSS ATTKKVLVPI GYGTEEIEAV
101: VLVDVLRRAG ADVTVASVEQ KLEVEGSSGT RLLADVLISK CADQVYDLVA LPGGMPGAVR LRDCEILEKI MKRQAEDKRL YGAISMAPAI TLLPWGLLTR
201: KRTTGHPAFF GKLPTFWAVK TNIQISGELT TSRGPGTSFQ FALSLAEQLF GETTAKSIEE FLLLRDGYQN PKNKEFNSID WSLDHTPRVL IPVANGSEAV
301: ELVSIADVLR RAKVDVTVSS VERSLRITAF QGTKIITDKL IGEAAESSYD LIILPGGHTG SERLQKSKIL KKLLREQHES GRIYGATNSS STVLHKHGLL
401: KEKRTTVYPS ESDEPMNQQM IEGAEVVIDG NVITSLGLAT VTKFSLAIVS KLFGHARARS VSEGLVHEYP RQ

Arabidopsis Description

DJ1CProtein DJ-1 homolog C [Source:UniProtKB/Swiss-Prot;Acc:Q8VY09]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.