Factsheet for Zm00001d031784_P003

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

plastid: 22065420
plastid: 23198870

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG25313	Sorghum	plastid	65.98	83.84
TraesCS4A01G376600.1	Wheat	plastid	55.84	72.22
TraesCS7D01G342200.1	Wheat	plastid	55.15	71.81
TraesCS7B01G246500.1	Wheat	plastid	55.15	71.81
TraesCS7A01G334600.1	Wheat	plastid	54.98	71.59
Os05t0519600-02	Rice	plastid	55.84	71.59
TraesCS7A01G078400.1	Wheat	plastid	54.64	70.35
TraesCS7D01G073600.1	Wheat	plastid	54.12	69.84
TraesCS7A01G334700.1	Wheat	plastid	48.8	69.78
HORVU7Hr1G082380.12	Barley	plastid	53.61	69.18
GSMUA_Achr10P...	Banana	cytosol	41.92	64.89
Solyc01g108070.2.1	Tomato	cytosol	42.1	60.34
KRH71131	Soybean	cytosol, mitochondrion, nucleus	30.07	56.63
VIT_03s0063g00300.t01	Wine grape	plastid	43.3	56.38
KRH50291	Soybean	plastid	42.78	55.33
CDY49268	Canola	plastid	26.63	49.68
CDY68228	Canola	plastid	38.32	48.48
CDX69022	Canola	plastid	38.32	48.48
Bra011486.1-P	Field mustard	plastid	37.97	48.04
AT4G34020.1	Thale cress	plastid	38.32	47.25
Zm00001d046135_P001	Maize	plastid	31.44	41.88
Bra017622.1-P	Field mustard	plastid	13.23	41.85
PGSC0003DMT400066294	Potato	plastid	38.49	41.1
Zm00001d039363_P001	Maize	mitochondrion	28.87	39.25

Protein Annotations

Gene3D:3.40.50.880	MapMan:35.1	UniProt:A0A1D6KL95	InterPro:Class_I_gatase-like	InterPro:DJ-1	InterPro:DJ-1/PfpI
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0009507
GO:GO:0009536	GO:GO:0009658	GO:GO:0009987	GO:GO:0016043	InterPro:IPR029062	ProteinID:ONM03661.1
ProteinID:ONM03663.1	PFAM:PF01965	PANTHER:PTHR43444	PANTHER:PTHR43444:SF2	SUPFAM:SSF52317	TIGRFAMs:TIGR01383
UniParc:UPI000844661B	EnsemblPlantsGene:Zm00001d031784	EnsemblPlants:Zm00001d031784_P003	EnsemblPlants:Zm00001d031784_T003	SEG:seg	:

Description

Protein DJ-1 homolog C

Coordinates

chr1:+:201757783..201763642

Molecular Weight (calculated)

62894.7 Da

IEP (calculated)

9.063

GRAVY (calculated)

0.017

Length

582 amino acids

Sequence
(BLAST)

001: MDGIIRCYGL SAGSRGAALR WRETGSARRR CDGLTRSRGC DDGVHGLGSA RVRWRAVRPC LGRAARFPCI PSPYPYLCSI CHIQTPTRFS RRLPRSYDLR
101: LSMLSPWHPL LSPVAPPAME LRSPLNSHNC SLTSSIRPPP PRSLARAPPT LSATAAAVSS LSATSAAISS PSCPKKKVLV PIAMGTEEME AVIIAGVLRR
201: ASADVTLASV EDGLEVEASC GSRIIADTHI ASCADQVFDL VALPGGMPGS VRLRDSDILQ RITVRQAEEK RLYGAICAAP AVVLVPWGLH RRKKITCHPS
301: FIGDLPAFRA VESNVQVSGE LTTSRGPGTT FQFALSFVEQ LFGLRAAEDM DKILCNQTSL KDWMLQGQTL GRMMAQTHDG LERSAEVNEL EWSCGRNPDV
401: LIPIANGCEE LEIIILVDIL RRAKINVVLA SVEKYPAVLG SQRMKIVADK SIMSASDSIY DLIILPGGPA GAEQLHRSRI LKKLLKQQMQ AGRMYGGVCS
501: ALKVLQQEGL LEDKTVTAHH AVASELTCQV IDQPNVVIDG NLITGKGLGT VVDFALAIIR KFFGHGRAKA VANGIVFEYP KS

Best Arabidopsis Sequence Match ( AT4G34020.1 )
(BLAST)

001: MGSLGYSISM IASLSPTLME SRLISSMGCV SMTVAPSFSS VSVVSSSLGT TRRDRTLKLR SSMSPGMVTT LDSDVGVGSS ATTKKVLVPI GYGTEEIEAV
101: VLVDVLRRAG ADVTVASVEQ KLEVEGSSGT RLLADVLISK CADQVYDLVA LPGGMPGAVR LRDCEILEKI MKRQAEDKRL YGAISMAPAI TLLPWGLLTR
201: KRTTGHPAFF GKLPTFWAVK TNIQISGELT TSRGPGTSFQ FALSLAEQLF GETTAKSIEE FLLLRDGYQN PKNKEFNSID WSLDHTPRVL IPVANGSEAV
301: ELVSIADVLR RAKVDVTVSS VERSLRITAF QGTKIITDKL IGEAAESSYD LIILPGGHTG SERLQKSKIL KKLLREQHES GRIYGATNSS STVLHKHGLL
401: KEKRTTVYPS ESDEPMNQQM IEGAEVVIDG NVITSLGLAT VTKFSLAIVS KLFGHARARS VSEGLVHEYP RQ

Arabidopsis Description

DJ1CProtein DJ-1 homolog C [Source:UniProtKB/Swiss-Prot;Acc:Q8VY09]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.