CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

cytosol 2
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50291	Soybean	plastid	85.76	58.89
Solyc01g108070.2.1	Tomato	cytosol	67.31	51.23
GSMUA_Achr10P...	Banana	cytosol	60.19	49.47
VIT_03s0063g00300.t01	Wine grape	plastid	67.96	46.98
Bra011486.1-P	Field mustard	plastid	62.14	41.74
CDY68228	Canola	plastid	61.81	41.52
CDX69022	Canola	plastid	61.16	41.09
AT4G34020.1	Thale cress	plastid	59.87	39.19
CDY49268	Canola	plastid	39.16	38.78
Os05t0519600-02	Rice	plastid	56.96	38.77
TraesCS7A01G078400.1	Wheat	plastid	56.63	38.72
KXG25313	Sorghum	plastid	57.28	38.65
TraesCS7A01G334600.1	Wheat	plastid	55.66	38.48
TraesCS4A01G376600.1	Wheat	plastid	55.99	38.44
TraesCS7D01G073600.1	Wheat	plastid	55.99	38.36
TraesCS7D01G342200.1	Wheat	plastid	55.34	38.26
TraesCS7B01G246500.1	Wheat	plastid	54.37	37.58
HORVU7Hr1G082380.12	Barley	plastid	53.07	36.36
TraesCS7A01G334700.1	Wheat	plastid	47.9	36.36
KRH27320	Soybean	nucleus	46.6	33.1
KRH21993	Soybean	endoplasmic reticulum, nucleus	46.6	32.95
PGSC0003DMT400066294	Potato	plastid	56.63	32.11
Zm00001d031784_P003	Maize	plastid	56.63	30.07
Bra017622.1-P	Field mustard	plastid	8.74	14.67

Protein Annotations

EMBL:ACUP02000866	EnsemblPlants:KRH71131	EnsemblPlantsGene:GLYMA_02G131600	EntrezGene:100792287	Gene3D:3.40.50.880	InterPro:Class_I_gatase-like
InterPro:DJ-1	InterPro:DJ-1/PfpI	InterPro:IPR029062	PANTHER:PTHR43444	PANTHER:PTHR43444:SF2	PFAM:PF01965
ProteinID:KRH71131	ProteinID:KRH71131.1	SEG:seg	SUPFAM:SSF52317	TIGRFAMs:TIGR01383	UniParc:UPI0006EE0B1F
UniProt:A0A0R0L321	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:13577916..13581914

Molecular Weight (calculated)

33540.9 Da

IEP (calculated)

9.763

GRAVY (calculated)

-0.047

Length

309 amino acids

Sequence
(BLAST)

001: MHSINFKRQG GMPGSARLRD CDVLRKITCR QAEENSLYGA ICAAPAVSLL PWGLLKKKKV SRGLTTSRGP GTSYQFALSL AEQLFGESVA KEVAELMLMR
101: TDDDNAAKKE FNKVEWSVGH HTPSVLVPIV HGSEEIEVVT VVDILRRAKA KVIVASVEKS LEVLASQGTK IVADILIGDA QESPYDLIIL PGGTAGAQRL
201: SKSRILKKLL KEQNSAKRIY GAVYSSLAIL QKQGLLKDKR TTAHPSVLVK LKDEEINGAK VDIDGKLITS EVLATVTDFA LAIVSKLFGN GRARSVAEGL
301: VFEYPKECM

Best Arabidopsis Sequence Match ( AT4G34020.2 )
(BLAST)

001: MGSLGYSISM IASLSPTLME SRLISSMGCV SMTVAPSFSS VSVVSSSLGT TRRDRTLKLR SSMSPGMVTT LDSDVGVGSS ATTKKKLEVE GSSGTRLLAD
101: VLISKCADQV YDLVALPGGM PGAVRLRDCE ILEKIMKRQA EDKRLYGAIS MAPAITLLPW GLLTRKRTTG HPAFFGKLPT FWAVKTNIQI SGELTTSRGP
201: GTSFQFALSL AEQLFGETTA KSIEEFLLLR DGYQNPKNKE FNSIDWSLDH TPRVLIPVAN GSEAVELVSI ADVLRRAKVD VTVSSVERSL RITAFQGTKI
301: ITDKLIGEAA ESSYDLIILP GGHTGSERLQ KSKILKKLLR EQHESGRIYG ATNSSSTVLH KHGLLKEKRT TVYPSESDEP MNQQMIEGAE VVIDGNVITS
401: LGLATVTKFS LAIVSKLFGH ARARSVSEGL VHEYPRQ

Arabidopsis Description

DJ1CProtein DJ-1 homolog C [Source:UniProtKB/Swiss-Prot;Acc:Q8VY09]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.