Factsheet for TraesCS7D01G329500.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G221900.1
TraesCS1B01G235100.2
TraesCS1D01G223600.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53280.1	TraesCS1A01G221900.1	AT5G05410.1	18552202
AT1G53280.1	TraesCS1B01G235100.2	AT5G05410.1	18552202
AT1G53280.1	TraesCS1D01G223600.2	AT5G05410.1	18552202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G349100.1	Wheat	plastid	96.09	96.09
Os06t0531200-01	Rice	plastid	80.69	89.09
HORVU7Hr1G079640.2	Barley	plastid	86.9	83.26
TraesCS7B01G233600.2	Wheat	mitochondrion	87.59	81.41
EER89866	Sorghum	plastid	80.46	79.01
Zm00001d046135_P001	Maize	plastid	79.31	78.95
GSMUA_Achr8P19930_001	Banana	cytosol	65.06	75.67
PGSC0003DMT400032252	Potato	cytosol, peroxisome, plastid	59.54	66.24
Solyc07g062610.2.1	Tomato	plastid	59.08	65.73
Bra039666.1-P	Field mustard	cytosol	59.08	65.39
VIT_19s0014g01520.t01	Wine grape	plastid	64.37	65.27
CDY24104	Canola	cytosol	58.85	65.14
KRH21993	Soybean	endoplasmic reticulum, nucleus	60.92	60.64
KRH27320	Soybean	nucleus	60.23	60.23
CDY02515	Canola	plastid	58.39	59.35
Bra030947.1-P	Field mustard	plastid	58.39	59.35
CDY59398	Canola	plastid	58.16	59.11
AT3G14990.1	Thale cress	cytosol	52.64	58.42
CDX95299	Canola	cytosol	52.41	58.31
Bra033480.1-P	Field mustard	cytosol	52.41	58.31
AT1G53280.1	Thale cress	plastid	58.62	58.22
Bra027286.1-P	Field mustard	cytosol	52.41	58.16
CDY23161	Canola	cytosol	52.18	58.06
CDX98521	Canola	cytosol	52.18	57.91
CDX97625	Canola	cytosol	51.95	57.65
CDX82455	Canola	cytosol, golgi, mitochondrion	51.03	56.63
TraesCS3D01G144800.1	Wheat	mitochondrion	55.4	56.57
Bra001577.1-P	Field mustard	cytosol, golgi, mitochondrion	50.8	56.38
CDX75800	Canola	cytosol, golgi, mitochondrion	50.34	55.87
CDY25999	Canola	golgi, plastid	58.16	51.21
TraesCS3D01G144900.1	Wheat	cytosol	42.76	47.21
TraesCS1D01G007700.1	Wheat	cytosol	49.2	46.42
TraesCS7D01G342200.1	Wheat	plastid	43.91	42.73
TraesCS7D01G073600.1	Wheat	plastid	43.22	41.69
VIT_15s0024g01260.t01	Wine grape	cytosol	20.0	36.1

Protein Annotations

EnsemblPlants:TraesCS7D01G329500.1	EnsemblPlantsGene:TraesCS7D01G329500	Gene3D:3.40.50.880	InterPro:Class_I_gatase-like	InterPro:DJ-1	InterPro:DJ-1/PfpI
InterPro:IPR029062	PANTHER:PTHR43444	PANTHER:PTHR43444:SF8	PFAM:PF01965	SEG:seg	SUPFAM:SSF52317
TIGR:cd03135	TIGRFAMs:TIGR01383	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr7D:-:421173367..421177427

Molecular Weight (calculated)

46074.1 Da

IEP (calculated)

6.379

GRAVY (calculated)

0.111

Length

435 amino acids

Sequence
(BLAST)

001: MATRPPVFST LTASFSPSPP HLLRRLQTLT RALASSSPQP MASSPPLKKV LVPIANGTEP MEAVITIDVL RRAGADVAVA SVEPGAAQVA ASWGVKLAAD
101: TLLADLAEAD FDLISLPGGM PGASTFRDCK ILENIVKKHA EKGKLYAAVC AAPAVALGAW GLLNGLKATC HPSVMDKLPS EVQAVESRVQ IDGNCVTSRG
201: PGTTMEYSVV LVEQLYGKEK ADEVAGPMVM RPQHGAEFSM KELNSTSWNV GENPQILVPI ANGTEEMEAV MIIDILRRAK ANVVVASLEG TLEIVASRNV
301: KMVADVLLDD ALKQQYDLIL LPGGLGGAQA YAKSDKLIGL IKKQAEASKL YGAICASPAI ALEPHGLLKG KKATSYPAMW SKLADQSECE NRVVVDGNMI
401: TSQGPGTSME FSLAIVEKLF GRERAFELAK SMVFV

Best Arabidopsis Sequence Match ( AT1G53280.1 )
(BLAST)

001: MASSSLCHRY FNKITVTPFF NTKKLHHYSP RRISLRVNRR SFSISATMSS STKKVLIPVA HGTEPFEAVV MIDVLRRGGA DVTVASVENQ VGVDACHGIK
101: MVADTLLSDI TDSVFDLIML PGGLPGGETL KNCKPLEKMV KKQDTDGRLN AAICCAPALA FGTWGLLEGK KATCYPVFME KLAACATAVE SRVEIDGKIV
201: TSRGPGTTME FSVTLVEQLL GKEKAVEVSG PLVMRPNPGD EYTITELNQV SWSFEGTPQI LVPIADGSEE MEAVAIIDVL KRAKANVVVA ALGNSLEVVA
301: SRKVKLVADV LLDEAEKNSY DLIVLPGGLG GAEAFASSEK LVNMLKKQAE SNKPYGAICA SPALVFEPHG LLKGKKATAF PAMCSKLTDQ SHIEHRVLVD
401: GNLITSRGPG TSLEFALAIV EKFYGREKGL QLSKATLV

Arabidopsis Description

DJ1BProtein DJ-1 homolog B [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.