CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01073
EES02247
OQU78515

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G11670.1	EES01073	AT2G42580.1	19000166
AT5G11670.1	EES02247	AT2G42580.1	19000166
AT5G11670.1	OQU78515	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d000316_P001	Maize	plastid	84.43	89.05
KXG21798	Sorghum	plastid	85.85	83.74
TraesCS3B01G128000.1	Wheat	cytosol	74.21	79.86
Os01t0188400-01	Rice	plastid	80.19	79.81
TraesCS3D01G110700.1	Wheat	plastid	79.72	78.97
EES19164	Sorghum	cytosol, peroxisome, plastid	70.75	78.95
TraesCS3A01G108900.1	Wheat	golgi	79.72	78.24
VIT_04s0008g00180.t01	Wine grape	cytosol	68.87	74.87
KXG33287	Sorghum	cytosol	69.18	74.2
CDX91199	Canola	cytosol	67.61	73.13
CDY61446	Canola	cytosol	67.61	73.13
Bra023336.1-P	Field mustard	cytosol	67.61	73.13
CDX88203	Canola	cytosol	67.14	72.62
Bra009866.1-P	Field mustard	cytosol	67.14	72.62
CDX80544	Canola	cytosol	66.98	72.45
CDX78432	Canola	cytosol	66.67	72.11
CDX70409	Canola	cytosol	66.51	71.94
AT5G11670.1	Thale cress	cytosol	66.51	71.94
Solyc08g066360.2.1	Tomato	nucleus, plastid, unclear	66.82	71.91
AT5G25880.1	Thale cress	cytosol	66.35	71.77
Bra006107.1-P	Field mustard	cytosol	66.35	71.77
EES01460	Sorghum	cytosol	66.19	70.99
KRH52781	Soybean	mitochondrion	68.87	70.76
KRH62099	Soybean	mitochondrion	68.55	70.1
OQU86165	Sorghum	mitochondrion	77.36	69.59
HORVU3Hr1G019790.9	Barley	plastid	79.09	69.0
OQU83656	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	20.13	68.09
VIT_02s0012g02460.t01	Wine grape	endoplasmic reticulum, plasma membrane	46.07	67.82
CDY02046	Canola	mitochondrion	54.09	61.54
PGSC0003DMT400008389	Potato	mitochondrion	20.91	50.19
KXG36268	Sorghum	mitochondrion	37.74	38.59
KXG38219	Sorghum	mitochondrion	37.11	38.19

Protein Annotations

Gene3D:3.40.50.10380	Gene3D:3.40.50.720	MapMan:5.1.1.4	EntrezGene:8078737	EMBL:AY274836	EnsemblPlants:EES00150
ProteinID:EES00150	ProteinID:EES00150.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004470
GO:GO:0004471	GO:GO:0004473	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006090	GO:GO:0006108	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016491	GO:GO:0046872	GO:GO:0051287	GO:GO:0055114
InterPro:IPR037062	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase	InterPro:Malic_enzyme_CS
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072	ScanProsite:PS00331
PANTHER:PTHR23406	PANTHER:PTHR23406:SF29	UniProt:Q84LQ5	SMART:SM00919	SMART:SM01274	EnsemblPlantsGene:SORBI_3003G036200
SUPFAM:SSF51735	SUPFAM:SSF53223	unigene:Sbi.14046	UniParc:UPI000019A0C3	RefSeq:XP_002455030.1	SEG:seg

Description

hypothetical protein

Coordinates

chr3:+:3317184..3322427

Molecular Weight (calculated)

69381.5 Da

IEP (calculated)

6.606

GRAVY (calculated)

-0.070

Length

636 amino acids

Sequence
(BLAST)

001: MISARAATVA AASPASPWKR GGGRSEGAGS CDGCSTYRKT VRRRAAAAKV RALPPKRVEA VAIGSAAETE TEEVVVEVAA ANEELPVMPW ATSVASGYTL
101: LRDPRHNKGL AFTEKERDAH YLRGLLPPAV VSQELQIKKF MNNLRQYQLP IQCYMAMMNL QETDERLFYK LLIENVVELL PYVYTPTVGE ACQKYGSIFG
201: RPQGLYVSLK DKGRVLEVLR NWPHRNVQVI CVTDGERILG LGDLGCQGMG IPVGKLALYT ALGGVDPSAC LPITIDVGTN NEKLLNDEFY IGLRQKRARG
301: EEYDELMEEF MAAVKTFYGE KVLIQFEDFA NHNAFDLLEK YSKTHLVFND DIQGTASVVL AGLLAALKMV GGTLAEQTYL FLGAGEAGTG IAELIALEMS
401: KQTKAPIEEC RKKVWLVDSK GLIVDSRKSS LAPFKKPWAH EHEPLTTLYD AVQSIKPTVL IGTSGVGRTF TKEIVEAMAS INERPIIFSL SNPTSHSECT
501: AEQAYTWTQG RAVFASGSPF APVEYDGKTF VPGQSNNAYI FPGLGLGLVI SGAVRVHEDM LLAASAALAD QATEENFVTG SIFPPFTNIR KISAYIAAAV
601: AAKAYELGLA TRLPPPKDLV AYAESCMYSP VYRNYQ

Best Arabidopsis Sequence Match ( AT1G79750.1 )
(BLAST)

001: MISLTPSLFL NKTVVPGCST RLSLRQPRTI ITPPASLRVF SSLGSNQDPT GSVLIETTAT SSSSLETSAA DIVPKSTVSG GVQDVYGEDA ATEDMPITPW
101: SLSVASGYTL LRDPHHNKGL AFSHRERDAH YLRGLLPPTV ISQDLQVKKI MHTLRQYQVP LQKYMAMMDL QETNERLFYK LLIDHVEELL PVIYTPTVGE
201: ACQKYGSIFL RPQGLFISLK EKGKIHEVLR NWPEKNIQVI VVTDGERILG LGDLGCQGMG IPVGKLSLYT ALGGVRPSAC LPVTIDVGTN NEKLLNDEFY
301: IGLRQRRATG EEYSELMHEF MTAVKQNYGE KVVIQFEDFA NHNAFDLLAK YGTTHLVFND DIQGTASVVL AGLIAALRFV GGSLSDHRFL FLGAGEAGTG
401: IAELIALEIS KKSHIPLEEA RKNIWLVDSK GLIVSSRKES IQHFKKPWAH DHEPIRELVD AVKAIKPTVL IGTSGVGQTF TQDVVETMAK LNEKPIILSL
501: SNPTSQSECT AEEAYTWSQG RAIFASGSPF APVEYEGKTF VPGQANNAYI FPGFGLGLIM SGTIRVHDDM LLAASEALAE ELMEEHYEKG MIYPPFRNIR
601: KISARIAAKV AAKAYELGLA TRLPQPKELE QCAESSMYSP SYRSYR

Arabidopsis Description

NADP-ME4Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A178W4H6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.