CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012764_P001	Maize	cytosol	81.28	96.98
Os01t0743500-01	Rice	plasma membrane, plastid	89.54	90.77
TraesCS3A01G275600.2	Wheat	cytosol, peroxisome, plastid	82.29	85.92
TraesCS3B01G309300.1	Wheat	mitochondrion	87.35	83.41
HORVU3Hr1G070850.1	Barley	mitochondrion	85.5	81.38
GSMUA_AchrUn_...	Banana	cytosol	77.4	77.8
VIT_11s0016g03210.t01	Wine grape	cytosol	77.07	77.33
EES19164	Sorghum	cytosol, peroxisome, plastid	74.2	77.19
AT2G19900.1	Thale cress	cytosol	75.55	77.11
KXG33287	Sorghum	cytosol	76.56	76.56
KRH74263	Soybean	cytosol	75.89	76.14
Bra039029.1-P	Field mustard	cytosol	74.7	76.12
KRH07269	Soybean	cytosol	75.72	75.97
CDY35901	Canola	cytosol	74.03	75.43
TraesCS3D01G275500.1	Wheat	cytosol	87.35	75.07
OQU83656	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	23.78	75.0
KRH60218	Soybean	mitochondrion	76.22	71.41
KRH12915	Soybean	cytosol	13.15	70.27
CDX82748	Canola	cytosol	68.8	69.98
KRH41507	Soybean	cytosol, peroxisome, plastid	64.76	68.45
KXG21798	Sorghum	plastid	73.36	66.72
EES00150	Sorghum	plastid	70.99	66.19
OQU86165	Sorghum	mitochondrion	63.58	53.32
KXG36268	Sorghum	mitochondrion	39.97	38.1
KXG38219	Sorghum	mitochondrion	39.46	37.86

Protein Annotations

Gene3D:3.40.50.10380	Gene3D:3.40.50.720	MapMan:5.1.1.4	EntrezGene:8075558	UniProt:C5XK02	EnsemblPlants:EES01460
ProteinID:EES01460	ProteinID:EES01460.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004470
GO:GO:0004471	GO:GO:0004473	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006090	GO:GO:0006108	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0016491	GO:GO:0046872	GO:GO:0051287	GO:GO:0055114
InterPro:IPR037062	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase	InterPro:Malic_enzyme_CS
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072	ScanProsite:PS00331
PANTHER:PTHR23406	PANTHER:PTHR23406:SF35	SMART:SM00919	SMART:SM01274	EnsemblPlantsGene:SORBI_3003G292400	SUPFAM:SSF51735
SUPFAM:SSF53223	unigene:Sbi.6943	UniParc:UPI0001A849A0	RefSeq:XP_002456340.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:+:62488685..62493225

Molecular Weight (calculated)

64784.9 Da

IEP (calculated)

6.443

GRAVY (calculated)

-0.125

Length

593 amino acids

Sequence
(BLAST)

001: MAGSGEGGNG GVPAGGEVAM APGVVTGGEE DAYGEDRATE DQPVTPWAVC IASGHSLLRD PRHNKGLSFT EKEREAHYLR GLLPPVVLSQ DLQEKRMLQN
101: VRQFQVPLQR YSALMDLQER NERLFYKLLI DNVEELLPVV YTPTVGEACQ KYGSIFRRPQ GLYVSLKDKG RILEVLRNWP EKSIQVIVVT DGERILGLGD
201: LGCQGMGIPV GKLALYTALG GVRPSACLPI TIDVGTNNED LLKDEFYIGL KQRRATGQEY SELLDEFMAA VRQNYGQKVL VQFEDFANHN AFTLLEKYRT
301: NHLVFNDDIQ GTAAVVLAGL IAALKSVGGT LADHTFLFFG AGEAGTGIAE LVALEISRQA KVSVEEARKK IWLVDSKGLI VTSRKETLQP FKKRYAHEHE
401: PVKDLLGAVK AIRPTALIGS AGVGQSFTKE VIEAMSSINE RPIILALSNP TSQSECTAEQ AYTWSQGRAI FGSGSPFDPV KYNDKLFVPA QANNAYIFPG
501: FGLGVVISGA VRVSDDMVLA AAEGLAEQVT PEHIEKGLIY PPFSIIRKIS ANIAARVAAK AYDLGMASQL PRPKDLVKYA ESCMYSPVYR TYR

Best Arabidopsis Sequence Match ( AT2G19900.1 )
(BLAST)

001: MEKVTNSDLK SSVDGGVVDV YGEDSATIEH NITPWSLSVS SGYSLLRDPR YNKGLAFTEK ERDTHYLRGL LPPVVLDQKL QEKRLLNNIR QYQFPLQKYM
101: ALTELQERNE RLFYKLLIDN VEELLPIVYT PTVGEACQKF GSIFRRPQGL FISLKDKGKI LDVLKNWPER NIQVIVVTDG ERILGLGDLG CQGMGIPVGK
201: LALYSALGGV RPSACLPVTI DVGTNNEKLL NDEFYIGLRQ KRATGQEYSE LLNEFMSAVK QNYGEKVLIQ FEDFANHNAF ELLAKYSDTH LVFNDDIQGT
301: ASVVLAGLVS AQKLTNSPLA EHTFLFLGAG EAGTGIAELI ALYMSKQMNA SVEESRKKIW LVDSKGLIVN SRKDSLQDFK KPWAHEHEPV KDLLGAIKAI
401: KPTVLIGSSG VGRSFTKEVI EAMSSINERP LIMALSNPTT QSECTAEEAY TWSKGRAIFA SGSPFDPVEY EGKVFVSTQA NNAYIFPGFG LGLVISGAIR
501: VHDDMLLAAA EALAGQVSKE NYEKGMIYPS FSSIRKISAQ IAANVATKAY ELGLAGRLPR PKDIVKCAES SMYSPTYRLY R

Arabidopsis Description

NADP-ME1NADP-dependent malic enzyme 1 [Source:UniProtKB/Swiss-Prot;Acc:O82191]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.