CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07269	Soybean	cytosol	97.63	97.63
KRH12915	Soybean	cytosol	16.58	88.29
GSMUA_AchrUn_...	Banana	cytosol	85.96	86.1
KRH60218	Soybean	mitochondrion	91.71	85.62
VIT_11s0016g03210.t01	Wine grape	cytosol	84.94	84.94
KRH41507	Soybean	cytosol, peroxisome, plastid	78.0	82.17
GSMUA_Achr7P13690_001	Banana	cytosol	79.53	81.74
AT2G19900.1	Thale cress	cytosol	80.2	81.58
Bra039029.1-P	Field mustard	cytosol	78.85	80.07
Zm00001d012764_P001	Maize	cytosol	67.17	79.88
CDY35901	Canola	cytosol	78.17	79.38
KRH52781	Soybean	mitochondrion	81.56	77.87
KRH62099	Soybean	mitochondrion	81.73	77.65
Os01t0743500-01	Rice	plasma membrane, plastid	76.14	76.92
EES01460	Sorghum	cytosol	76.14	75.89
TraesCS3A01G275600.2	Wheat	cytosol, peroxisome, plastid	71.74	74.65
CDX82748	Canola	cytosol	73.27	74.27
KRH09931	Soybean	mitochondrion, plastid	79.86	73.41
GSMUA_Achr10P...	Banana	plastid	81.22	72.84
KRH23402	Soybean	nucleus	79.53	72.64
TraesCS3B01G309300.1	Wheat	mitochondrion	75.97	72.3
KRH44278	Soybean	plastid	78.34	72.23
GSMUA_Achr3P31710_001	Banana	cytosol	79.19	71.78
HORVU3Hr1G070850.1	Barley	mitochondrion	74.62	70.79
TraesCS3D01G275500.1	Wheat	cytosol	75.97	65.07
KRH47214	Soybean	mitochondrion	57.02	58.61
KRH13473	Soybean	plastid	11.84	56.91
KRH65116	Soybean	mitochondrion	39.42	38.58
KRH66385	Soybean	mitochondrion	40.44	38.42
KRH48207	Soybean	mitochondrion	39.09	38.24
KRH00689	Soybean	mitochondrion	38.75	38.17
KRH40505	Soybean	mitochondrion	38.75	38.1
KRH01213	Soybean	cytosol, plastid	16.75	34.86

Protein Annotations

EntrezGene:100796117	Gene3D:3.40.50.10380	Gene3D:3.40.50.720	MapMan:5.1.1.4	EMBL:ACUP02000011	EnsemblPlantsGene:GLYMA_01G008500
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004470	GO:GO:0004471	GO:GO:0004473
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006090
GO:GO:0006108	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0016491	GO:GO:0046872	GO:GO:0051287	GO:GO:0055114	UniProt:I1J4J6	InterPro:IPR037062
EnsemblPlants:KRH74263	ProteinID:KRH74263	ProteinID:KRH74263.1	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf
InterPro:Malic_OxRdtase	InterPro:Malic_enzyme_CS	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106
PRINTS:PR00072	ScanProsite:PS00331	PANTHER:PTHR23406	PANTHER:PTHR23406:SF26	SMART:SM00919	SMART:SM01274
SUPFAM:SSF51735	SUPFAM:SSF53223	UniParc:UPI0002336FB6	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:827132..832098

Molecular Weight (calculated)

65030.2 Da

IEP (calculated)

6.053

GRAVY (calculated)

-0.125

Length

591 amino acids

Sequence
(BLAST)

001: MESTLKALRD GESVLDLSPR STVSGGVEDV YGEDHATEDQ LVTPWNFSVA SGYCLLRDPQ YNKGLAFTEK ERDAHYLRGL LPPTITSQQL QGKQLINNIR
101: QYQVPLQKYQ AMMELQETNE RLFYKLLIDN VEELLPIVYT PVVGEACQKY GSIFKRPQGL FISLKEKGKI LEVLKNWPEK SIQVIVVTDG ERILGLGDLG
201: CQGMGIPVGK LALYTALGGV RPSACLPITI DVGTNNEKLL NDEFYIGLRQ KRATGQEYSE LLHEFMTAVK QNYGEKVLVQ FEDFANHNAF ELLAKYGTTH
301: LVFNDDIQGT ASVVLAGVVA ALKLIGGTLA DHTFLFLGAG EAGTGIAELI ALEMSKQTKT PIEETRKKIW LVDSKGLIVG SRKASLQHFK QPWAHEHEPV
401: GSLLEAVKVI KPTVLIGSSG VGKTFTKEVI EAVTSINEKP LVLALSNPTS QSECTAEEAY QWSEGRAIFA SGSPFDPVEY KGKVYYSGQA NNAYIFPGFG
501: LGLVISGAIR VHDDMLLAAS EALAKLVSNE NYEKGLIYPP FSNIREISAN IAASVAGKAY ELGLATRLPR PQNLVKYAES CMYSPVYRNY R

Best Arabidopsis Sequence Match ( AT2G19900.1 )
(BLAST)

001: MEKVTNSDLK SSVDGGVVDV YGEDSATIEH NITPWSLSVS SGYSLLRDPR YNKGLAFTEK ERDTHYLRGL LPPVVLDQKL QEKRLLNNIR QYQFPLQKYM
101: ALTELQERNE RLFYKLLIDN VEELLPIVYT PTVGEACQKF GSIFRRPQGL FISLKDKGKI LDVLKNWPER NIQVIVVTDG ERILGLGDLG CQGMGIPVGK
201: LALYSALGGV RPSACLPVTI DVGTNNEKLL NDEFYIGLRQ KRATGQEYSE LLNEFMSAVK QNYGEKVLIQ FEDFANHNAF ELLAKYSDTH LVFNDDIQGT
301: ASVVLAGLVS AQKLTNSPLA EHTFLFLGAG EAGTGIAELI ALYMSKQMNA SVEESRKKIW LVDSKGLIVN SRKDSLQDFK KPWAHEHEPV KDLLGAIKAI
401: KPTVLIGSSG VGRSFTKEVI EAMSSINERP LIMALSNPTT QSECTAEEAY TWSKGRAIFA SGSPFDPVEY EGKVFVSTQA NNAYIFPGFG LGLVISGAIR
501: VHDDMLLAAA EALAGQVSKE NYEKGMIYPS FSSIRKISAQ IAANVATKAY ELGLAGRLPR PKDIVKCAES SMYSPTYRLY R

Arabidopsis Description

NADP-ME1NADP-dependent malic enzyme 1 [Source:UniProtKB/Swiss-Prot;Acc:O82191]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.