CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g066290.2.1	Tomato	cytosol	34.15	58.33
KRH01213	Soybean	cytosol, plastid	66.67	28.87
KRH47214	Soybean	mitochondrion	64.23	13.74
KRH09931	Soybean	mitochondrion, plastid	66.67	12.75
KRH23402	Soybean	nucleus	66.67	12.67
KRH74263	Soybean	cytosol	56.91	11.84
KRH07269	Soybean	cytosol	56.91	11.84
VIT_09s0002g03620.t01	Wine grape	cytosol	60.16	11.56
PGSC0003DMT400068027	Potato	plastid	60.16	11.56
KRH44278	Soybean	plastid	60.16	11.54
PGSC0003DMT400006726	Potato	plastid	59.35	11.37
KRH52781	Soybean	mitochondrion	56.1	11.15
KRH62099	Soybean	mitochondrion	56.1	11.09
KRH60218	Soybean	mitochondrion	56.91	11.06
KRH41507	Soybean	cytosol, peroxisome, plastid	41.46	9.09
KRH65116	Soybean	mitochondrion	30.08	6.13
KRH48207	Soybean	mitochondrion	29.27	5.96
KRH66385	Soybean	mitochondrion	30.08	5.95
KRH40505	Soybean	mitochondrion	27.64	5.66
KRH00689	Soybean	mitochondrion	26.83	5.5
HORVU5Hr1G053200.1	Barley	endoplasmic reticulum, extracellular	0.0	0.0
KRH12915	Soybean	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	UniProt:A0A0R0G5F6	EMBL:ACUP02009736	EnsemblPlantsGene:GLYMA_15G241700	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004473	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006090	GO:GO:0006108	GO:GO:0008150	GO:GO:0008152
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0051287
GO:GO:0055114	EnsemblPlants:KRH13473	ProteinID:KRH13473	ProteinID:KRH13473.1	InterPro:Malic_NAD-bd	InterPro:NAD(P)-bd_dom_sf
PFAM:PF03949	PANTHER:PTHR23406	PANTHER:PTHR23406:SF36	SUPFAM:SSF51735	UniParc:UPI0006EDD8C8	SEG:seg

Description

hypothetical protein

Coordinates

chr15:+:45942822..45944993

Molecular Weight (calculated)

13098.7 Da

IEP (calculated)

8.073

GRAVY (calculated)

0.110

Length

123 amino acids

Sequence
(BLAST)

001: MEGSGGRITA NNAYIFPGFG LGLIMSGTTR VHDDLLWAAS EALAAQVSQE NFDKGLIYPP FTNIRKISAH IAANVASKAY ELGLATRALL SLTLLVASLE
101: SLSCATAETR RGTPSQCHPR CFN

Best Arabidopsis Sequence Match ( AT5G25880.1 )
(BLAST)

001: MGTNQTQISD EYVTGNSSGV GGGISDVYGE DSATLDQLVT PWVTSVASGY TLMRDPRYNK GLAFTDKERD AHYITGLLPP VVLSQDVQER KVMHNLRQYT
101: VPLQRYMALM DLQERNERLF YKLLIDNVEE LLPVVYTPTV GEACQKYGSI YRRPQGLYIS LKEKGKILEV LKNWPQRGIQ VIVVTDGERI LGLGDLGCQG
201: MGIPVGKLSL YTALGGIRPS ACLPITIDVG TNNEKLLNNE FYIGLKQKRA NGEEYAEFLQ EFMCAVKQNY GEKVLVQFED FANHHAFELL SKYCSSHLVF
301: NDDIQGTASV VLAGLIAAQK VLGKSLADHT FLFLGAGEAG TGIAELIALK ISKETGKPID ETRKKIWLVD SKGLIVSERK ESLQHFKQPW AHDHKPVKEL
401: LAAVNAIKPT VLIGTSGVGK TFTKEVVEAM ATLNEKPLIL ALSNPTSQAE CTAEEAYTWT KGRAIFASGS PFDPVQYDGK KFTPGQANNC YIFPGLGLGL
501: IMSGAIRVRD DMLLAASEAL ASQVTEENFA NGLIYPPFAN IRKISANIAA SVGAKTYELG LASNLPRPKD LVKMAESCMY SPVYRNFR

Arabidopsis Description

NADP-ME3Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A178UAR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.