CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
plastid 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12915	Soybean	cytosol	17.11	86.49
KRH60218	Soybean	mitochondrion	88.41	78.36
KRH74263	Soybean	cytosol	82.17	78.0
KRH07269	Soybean	cytosol	82.17	78.0
VIT_11s0016g03210.t01	Wine grape	cytosol	77.72	73.77
GSMUA_AchrUn_...	Banana	cytosol	77.36	73.56
GSMUA_Achr7P13690_001	Banana	cytosol	73.08	71.3
AT2G19900.1	Thale cress	cytosol	71.3	68.85
Bra039029.1-P	Field mustard	cytosol	71.12	68.56
CDY35901	Canola	cytosol	70.77	68.21
KRH52781	Soybean	mitochondrion	74.33	67.37
KRH62099	Soybean	mitochondrion	74.33	67.04
Os01t0743500-01	Rice	plasma membrane, plastid	68.98	66.15
Zm00001d012764_P001	Maize	cytosol	58.11	65.59
EES01460	Sorghum	cytosol	68.45	64.76
TraesCS3A01G275600.2	Wheat	cytosol, peroxisome, plastid	64.88	64.08
CDX82748	Canola	cytosol	66.31	63.81
KRH09931	Soybean	mitochondrion, plastid	72.55	63.3
GSMUA_Achr10P...	Banana	plastid	74.15	63.13
GSMUA_Achr3P31710_001	Banana	cytosol	73.26	63.04
KRH23402	Soybean	nucleus	72.37	62.75
TraesCS3B01G309300.1	Wheat	mitochondrion	68.45	61.84
KRH44278	Soybean	plastid	70.41	61.62
HORVU3Hr1G070850.1	Barley	mitochondrion	67.2	60.51
TraesCS3D01G275500.1	Wheat	cytosol	68.45	55.65
KRH47214	Soybean	mitochondrion	49.73	48.52
KRH13473	Soybean	plastid	9.09	41.46
KRH00689	Soybean	mitochondrion	36.54	34.17
KRH65116	Soybean	mitochondrion	36.72	34.11
KRH48207	Soybean	mitochondrion	36.72	34.11
KRH40505	Soybean	mitochondrion	36.36	33.94
KRH66385	Soybean	mitochondrion	37.43	33.76
KRH01213	Soybean	cytosol, plastid	13.19	26.06

Protein Annotations

Gene3D:3.40.50.10380	Gene3D:3.40.50.720	MapMan:5.1.1.4	EMBL:ACUP02004769	EnsemblPlantsGene:GLYMA_08G034300	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004470	GO:GO:0004471	GO:GO:0004473	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006090	GO:GO:0006108
GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016491
GO:GO:0046872	GO:GO:0051287	GO:GO:0055114	InterPro:IPR037062	UniProt:K7L4Q7	EnsemblPlants:KRH41507
ProteinID:KRH41507	ProteinID:KRH41507.1	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase
InterPro:Malic_enzyme_CS	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072
ScanProsite:PS00331	PANTHER:PTHR23406	PANTHER:PTHR23406:SF26	SMART:SM00919	SMART:SM01274	SUPFAM:SSF51735
SUPFAM:SSF53223	UniParc:UPI0002961AC1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:2721624..2726347

Molecular Weight (calculated)

62341.0 Da

IEP (calculated)

5.818

GRAVY (calculated)

-0.162

Length

561 amino acids

Sequence
(BLAST)

001: MESTLKALRD GESVLDLSPR STVSGGVEDI YGEDRATEDQ LVIPWTVSVA SGYSLLRDPQ YNKGLAFTEK ERDAHYLRGL LPPTVSTQQL QIYLLISMRE
101: KKLMNSIRQY QVPLQKYVAM MDLQERNERL FYKLLIDNVE ELLPVKYGSI FRRPQGLYIS LKERGKILEV LKNWPERSIQ VIVLTDGEWI LGLGDLGCQG
201: MGIPVGKLAS YTALGGCLPI TMDVGTNNEK LLNDEFYIGL RQKRATGQEY YDLMHEFMTA VKQNYGENVL VQFEDFANHN AFELLAKYGT THLVFNDDIQ
301: GTASVVLAGV VAALKLIGGT LPEHTFLFLG AGEAGTGIAE LIALEMSKQT KAPIEETRKK IWLVDSKPVN SLLEAVKVIK PTVLIGSLGV GRTFTKEVVE
401: AMTSNNDKPL IMALSNPTSQ SECTAEEAYQ WSEGRAIFAS GSPFDPVEYK GKVYASGQHN IISDSFLVNS GQQCLNFPWL WFGFSNLRSN STESLAKQVS
501: EENYKNGLIY PPFSNIRKIS ANIAANVAAK AYKLGLATRL PRPQNLVKYA ESCMYTATIG E

Best Arabidopsis Sequence Match ( AT1G79750.1 )
(BLAST)

001: MISLTPSLFL NKTVVPGCST RLSLRQPRTI ITPPASLRVF SSLGSNQDPT GSVLIETTAT SSSSLETSAA DIVPKSTVSG GVQDVYGEDA ATEDMPITPW
101: SLSVASGYTL LRDPHHNKGL AFSHRERDAH YLRGLLPPTV ISQDLQVKKI MHTLRQYQVP LQKYMAMMDL QETNERLFYK LLIDHVEELL PVIYTPTVGE
201: ACQKYGSIFL RPQGLFISLK EKGKIHEVLR NWPEKNIQVI VVTDGERILG LGDLGCQGMG IPVGKLSLYT ALGGVRPSAC LPVTIDVGTN NEKLLNDEFY
301: IGLRQRRATG EEYSELMHEF MTAVKQNYGE KVVIQFEDFA NHNAFDLLAK YGTTHLVFND DIQGTASVVL AGLIAALRFV GGSLSDHRFL FLGAGEAGTG
401: IAELIALEIS KKSHIPLEEA RKNIWLVDSK GLIVSSRKES IQHFKKPWAH DHEPIRELVD AVKAIKPTVL IGTSGVGQTF TQDVVETMAK LNEKPIILSL
501: SNPTSQSECT AEEAYTWSQG RAIFASGSPF APVEYEGKTF VPGQANNAYI FPGFGLGLIM SGTIRVHDDM LLAASEALAE ELMEEHYEKG MIYPPFRNIR
601: KISARIAAKV AAKAYELGLA TRLPQPKELE QCAESSMYSP SYRSYR

Arabidopsis Description

NADP-ME4Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A178W4H6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.