CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039029.1-P	Field mustard	cytosol	99.14	99.14
AT2G19900.1	Thale cress	cytosol	93.3	93.46
CDX82748	Canola	cytosol	90.55	90.39
KRH07269	Soybean	cytosol	79.73	78.51
KRH74263	Soybean	cytosol	79.38	78.17
Zm00001d012764_P001	Maize	cytosol	66.67	78.07
GSMUA_AchrUn_...	Banana	cytosol	78.52	77.46
VIT_11s0016g03210.t01	Wine grape	cytosol	78.35	77.16
GSMUA_Achr7P13690_001	Banana	cytosol	74.57	75.48
Os01t0743500-01	Rice	plasma membrane, plastid	75.43	75.04
EES01460	Sorghum	cytosol	75.43	74.03
CDX91199	Canola	cytosol	74.57	73.81
CDX88203	Canola	cytosol	74.4	73.64
CDX80544	Canola	cytosol	74.23	73.47
CDY61446	Canola	cytosol	74.23	73.47
KRH60218	Soybean	mitochondrion	79.73	73.3
CDX70409	Canola	cytosol	73.88	73.13
CDX78432	Canola	cytosol	73.88	73.13
KRH12915	Soybean	cytosol	13.92	72.97
TraesCS3A01G275600.2	Wheat	cytosol, peroxisome, plastid	70.27	72.01
KRH41507	Soybean	cytosol, peroxisome, plastid	68.21	70.77
TraesCS3B01G309300.1	Wheat	mitochondrion	74.23	69.57
GSMUA_Achr3P31710_001	Banana	cytosol	77.15	68.86
HORVU3Hr1G070850.1	Barley	mitochondrion	73.2	68.38
GSMUA_Achr10P...	Banana	plastid	76.63	67.68
CDX68115	Canola	plastid	74.91	66.77
CDX85926	Canola	plastid	71.48	66.35
TraesCS3D01G275500.1	Wheat	cytosol	74.23	62.61
CDY02046	Canola	mitochondrion	58.93	61.36
CDY33808	Canola	endoplasmic reticulum, extracellular	3.26	54.29
CDY37211	Canola	mitochondrion	42.1	39.64
CDX81448	Canola	mitochondrion	41.92	39.48
CDY68746	Canola	mitochondrion	39.35	37.85
CDX74340	Canola	mitochondrion	39.52	37.83
CDY51151	Canola	mitochondrion	39.35	37.73
CDY07209	Canola	mitochondrion	39.35	37.6

Protein Annotations

Gene3D:3.40.50.10380	Gene3D:3.40.50.720	MapMan:5.1.1.4	GO:A0A078HDQ6	UniProt:A0A078HDQ6	EnsemblPlants:CDY35901
ProteinID:CDY35901	ProteinID:CDY35901.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004470
GO:GO:0004471	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872
GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00059449001	InterPro:IPR037062	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom
InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase	InterPro:Malic_enzyme_CS	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949
PIRSF:PIRSF000106	PRINTS:PR00072	ScanProsite:PS00331	PANTHER:PTHR23406	PANTHER:PTHR23406:SF35	SMART:SM00919
SMART:SM01274	SUPFAM:SSF51735	SUPFAM:SSF53223	UniParc:UPI0004EE8D9F	SEG:seg	:

Description

BnaA07g00860DMalic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A078HDQ6]

Coordinates

chrLK032363:-:235325..238590

Molecular Weight (calculated)

64471.4 Da

IEP (calculated)

6.957

GRAVY (calculated)

-0.194

Length

582 amino acids

Sequence
(BLAST)

001: MEKNVKNSDM KSSVNGGVVD VYGEDSATIE HSITPWSLSV SSGYSLLRDP RYNKGLAFSE KERDTHYLRG LLPPAVVDQN LQEKRLINNI RQYQYPLQKY
101: MALTELQERN ERLFYKLLID HVEELLPIVY TPTVGEACQK YGSIFRRPQG LFISLKERGK ILDVLKNWPE RNIQVIVVTD GERILGLGDL GCQGMGIPVG
201: KLALYTALGG VRPSACLPVT IDVGTNNEKL LNDEFYIGLK QKRATGQEYR DLLHEFMSAV KQNYGENVLI QFEDFANHHA FELLAKYRDS HLVFNDDIQG
301: TAAVVLAGLV SAQKLTNSPL AEHTFLFLGA GEAGTGIAEL IALYISKQMN ASVEESRKKI WLVDSKGLIV NSRKESLQAF KKPWAHEHEP DNDLLGAIKA
401: IKPNVLIGSA GIGRSFTKEV IEAMSSINER PLIMALSNPT TQSECTAEEA YTWSKGRAIF ASGSPFDPVE YEGSVFVSTQ ANNAYIFPGF GLGLVISGAV
501: RVHDDMLLAA ADALAGQVSK ENYEKGMIYP SFSSIRKISA HIAANVATKA YELGLAGRLP RPKEIVKCAE SSMYSPTYRI YR

Best Arabidopsis Sequence Match ( AT2G19900.1 )
(BLAST)

001: MEKVTNSDLK SSVDGGVVDV YGEDSATIEH NITPWSLSVS SGYSLLRDPR YNKGLAFTEK ERDTHYLRGL LPPVVLDQKL QEKRLLNNIR QYQFPLQKYM
101: ALTELQERNE RLFYKLLIDN VEELLPIVYT PTVGEACQKF GSIFRRPQGL FISLKDKGKI LDVLKNWPER NIQVIVVTDG ERILGLGDLG CQGMGIPVGK
201: LALYSALGGV RPSACLPVTI DVGTNNEKLL NDEFYIGLRQ KRATGQEYSE LLNEFMSAVK QNYGEKVLIQ FEDFANHNAF ELLAKYSDTH LVFNDDIQGT
301: ASVVLAGLVS AQKLTNSPLA EHTFLFLGAG EAGTGIAELI ALYMSKQMNA SVEESRKKIW LVDSKGLIVN SRKDSLQDFK KPWAHEHEPV KDLLGAIKAI
401: KPTVLIGSSG VGRSFTKEVI EAMSSINERP LIMALSNPTT QSECTAEEAY TWSKGRAIFA SGSPFDPVEY EGKVFVSTQA NNAYIFPGFG LGLVISGAIR
501: VHDDMLLAAA EALAGQVSKE NYEKGMIYPS FSSIRKISAQ IAANVATKAY ELGLAGRLPR PKDIVKCAES SMYSPTYRLY R

Arabidopsis Description

NADP-ME1NADP-dependent malic enzyme 1 [Source:UniProtKB/Swiss-Prot;Acc:O82191]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.