CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68746	Canola	mitochondrion	82.86	4.79
CDX74340	Canola	mitochondrion	82.86	4.77
CDY51151	Canola	mitochondrion	80.0	4.61
CDY07209	Canola	mitochondrion	80.0	4.6
CDX81448	Canola	mitochondrion	71.43	4.05
CDY37211	Canola	mitochondrion	71.43	4.05
CDY35901	Canola	cytosol	54.29	3.26
CDX82748	Canola	cytosol	54.29	3.26
CDX70409	Canola	cytosol	54.29	3.23
CDX78432	Canola	cytosol	54.29	3.23
CDX80544	Canola	cytosol	54.29	3.23
CDX88203	Canola	cytosol	54.29	3.23
CDX91199	Canola	cytosol	54.29	3.23
CDY61446	Canola	cytosol	54.29	3.23
CDY02046	Canola	mitochondrion	51.43	3.22
CDX68115	Canola	plastid	54.29	2.91
CDX85926	Canola	plastid	22.86	1.28
HORVU3Hr1G068570.1	Barley	cytosol	0.0	0.0
VIT_03s0038g00040.t01	Wine grape	extracellular	0.0	0.0
VIT_15s0045g00190.t01	Wine grape	extracellular	0.0	0.0
VIT_16s0039g00360.t01	Wine grape	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:CDY33808	EnsemblPlantsGene:GSBRNA2T00055237001	Gene3D:3.40.50.10380	GO:A0A078HAD8	GO:GO:0003674	GO:GO:0003824
GO:GO:0004471	GO:GO:0008150	GO:GO:0008152	GO:GO:0055114	InterPro:IPR037062	InterPro:Malic_N_dom
InterPro:Malic_N_dom_sf	PANTHER:PTHR23406	PANTHER:PTHR23406:SF32	PFAM:PF00390	ProteinID:CDY33808	ProteinID:CDY33808.1
SUPFAM:SSF53223	UniParc:UPI0004EDDC74	UniProt:A0A078HAD8	MapMan:35.2	:	:

Description

BnaCnng07260DBnaCnng07260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAD8]

Coordinates

chrLK032322:+:2423..2530

Molecular Weight (calculated)

3690.8 Da

IEP (calculated)

8.526

GRAVY (calculated)

0.877

Length

35 amino acids

Sequence
(BLAST)

1: MIFITKCSRI LGLGDLGVHG IGIPIGKLDM YVSAT

Best Arabidopsis Sequence Match ( AT4G00570.1 )
(BLAST)

001: MMWKNIAGLS KAAAAARTHG SRRCFSTAIP GPCIVHKRGA DILHDPWFNK DTGFPLTERD RLGIRGLLPP RVMTCVQQCD RFIESFRSLE NNTKGEPENV
101: VALAKWRMLN RLHDRNETLY YRVLIDNIKD FAPIIYTPTV GLVCQNYSGL YRRPRGMYFS AKDKGEMMSM IYNWPAPQVD MIVITDGSRI LGLGDLGVQG
201: IGIPIGKLDM YVAAAGINPQ RVLPIMLDVG TNNEKLLQND LYLGVRQPRL EGEEYLEIID EFMEAAFTRW PKAVVQFEDF QAKWAFGTLE RYRKKFCMFN
301: DDVQGTAGVA LAGLLGTVRA QGRPISDFVN QKIVVVGAGS AGLGVTKMAV QAVARMAGIS ESEATKNFYL IDKDGLVTTE RTKLDPGAVL FAKNPAEIRE
401: GASIVEVVKK VRPHVLLGLS GVGGIFNEEV LKAMRESDSC KPAIFAMSNP TLNAECTAAD AFKHAGGNIV FASGSPFENV ELENGKVGHV NQANNMYLFP
501: GIGLGTLLSG ARIVTDGMLQ AASECLASYM TDEEVQKGIL YPSINNIRHI TAEVGAAVLR AAVTDDIAEG HGDVGPKDLS HMSKEDTVNY ITRNMWFPVY
601: SPLVHEK

Arabidopsis Description

NAD-ME2NAD-dependent malic enzyme 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8L7K9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.