Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G053200.1 | Barley | endoplasmic reticulum, extracellular | 8.33 | 6.15 |
| HORVU3Hr1G068600.2 | Barley | mitochondrion, plastid | 62.5 | 4.24 |
| HORVU3Hr1G070850.1 | Barley | mitochondrion | 52.08 | 4.01 |
| HORVU1Hr1G028030.16 | Barley | mitochondrion | 45.83 | 3.58 |
| HORVU3Hr1G019790.9 | Barley | plastid | 50.0 | 3.29 |
| HORVU1Hr1G045720.1 | Barley | plastid | 41.67 | 2.75 |
| HORVU2Hr1G050980.2 | Barley | mitochondrion, plastid | 35.42 | 2.59 |
| HORVU5Hr1G018620.1 | Barley | cytosol | 4.17 | 1.72 |
| HORVU3Hr1G102340.13 | Barley | plastid | 4.17 | 0.83 |
| CDY33808 | Canola | endoplasmic reticulum, extracellular | 0.0 | 0.0 |
| VIT_03s0038g00040.t01 | Wine grape | extracellular | 0.0 | 0.0 |
| VIT_15s0045g00190.t01 | Wine grape | extracellular | 0.0 | 0.0 |
| VIT_16s0039g00360.t01 | Wine grape | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G068570.1 | EnsemblPlantsGene:HORVU3Hr1G068570 | Gene3D:1.20.1370.30 | PANTHER:PTHR23406 | PANTHER:PTHR23406:SF29 | SUPFAM:SSF53223 |
| UniParc:UPI000B4810CE | UniProt:A0A287LHL5 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:519829617..519829836
Molecular Weight (calculated)
5687.0 Da
IEP (calculated)
9.923
GRAVY (calculated)
-0.577
Length
48 amino acids
Sequence
(BLAST)
(BLAST)
1: GIHATTRGLA FTEKERETHY LRGLLPPIVI SQELQERKIM HNIRQYQL
001: MEKVTNSDLK SSVDGGVVDV YGEDSATIEH NITPWSLSVS SGYSLLRDPR YNKGLAFTEK ERDTHYLRGL LPPVVLDQKL QEKRLLNNIR QYQFPLQKYM
101: ALTELQERNE RLFYKLLIDN VEELLPIVYT PTVGEACQKF GSIFRRPQGL FISLKDKGKI LDVLKNWPER NIQVIVVTDG ERILGLGDLG CQGMGIPVGK
201: LALYSALGGV RPSACLPVTI DVGTNNEKLL NDEFYIGLRQ KRATGQEYSE LLNEFMSAVK QNYGEKVLIQ FEDFANHNAF ELLAKYSDTH LVFNDDIQGT
301: ASVVLAGLVS AQKLTNSPLA EHTFLFLGAG EAGTGIAELI ALYMSKQMNA SVEESRKKIW LVDSKGLIVN SRKDSLQDFK KPWAHEHEPV KDLLGAIKAI
401: KPTVLIGSSG VGRSFTKEVI EAMSSINERP LIMALSNPTT QSECTAEEAY TWSKGRAIFA SGSPFDPVEY EGKVFVSTQA NNAYIFPGFG LGLVISGAIR
501: VHDDMLLAAA EALAGQVSKE NYEKGMIYPS FSSIRKISAQ IAANVATKAY ELGLAGRLPR PKDIVKCAES SMYSPTYRLY R
101: ALTELQERNE RLFYKLLIDN VEELLPIVYT PTVGEACQKF GSIFRRPQGL FISLKDKGKI LDVLKNWPER NIQVIVVTDG ERILGLGDLG CQGMGIPVGK
201: LALYSALGGV RPSACLPVTI DVGTNNEKLL NDEFYIGLRQ KRATGQEYSE LLNEFMSAVK QNYGEKVLIQ FEDFANHNAF ELLAKYSDTH LVFNDDIQGT
301: ASVVLAGLVS AQKLTNSPLA EHTFLFLGAG EAGTGIAELI ALYMSKQMNA SVEESRKKIW LVDSKGLIVN SRKDSLQDFK KPWAHEHEPV KDLLGAIKAI
401: KPTVLIGSSG VGRSFTKEVI EAMSSINERP LIMALSNPTT QSECTAEEAY TWSKGRAIFA SGSPFDPVEY EGKVFVSTQA NNAYIFPGFG LGLVISGAIR
501: VHDDMLLAAA EALAGQVSKE NYEKGMIYPS FSSIRKISAQ IAANVATKAY ELGLAGRLPR PKDIVKCAES SMYSPTYRLY R
Arabidopsis Description
NADP-ME1NADP-dependent malic enzyme 1 [Source:UniProtKB/Swiss-Prot;Acc:O82191]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.