Factsheet for HORVU3Hr1G068600.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G285900.2	Wheat	cytosol	82.74	98.48
TraesCS3D01G285700.2	Wheat	plastid	90.66	96.97
KXG33287	Sorghum	cytosol	78.64	93.76
TraesCS3B01G320200.1	Wheat	cytosol, peroxisome, plastid	79.07	87.62
Zm00001d043601_P003	Maize	mitochondrion	82.04	87.35
Os01t0723400-04	Rice	plastid	74.96	82.43
Solyc05g050120.2.1	Tomato	plastid	65.91	80.48
PGSC0003DMT400084201	Potato	cytosol	65.77	80.31
PGSC0003DMT400000961	Potato	cytosol	66.2	79.46
Solyc12g008430.1.1	Tomato	plastid	65.21	78.27
HORVU5Hr1G053200.1	Barley	endoplasmic reticulum, extracellular	7.07	76.92
HORVU1Hr1G028030.16	Barley	mitochondrion	65.35	75.24
HORVU3Hr1G070850.1	Barley	mitochondrion	63.37	71.91
HORVU3Hr1G019790.9	Barley	plastid	68.18	66.12
VIT_16s0039g00580.t01	Wine grape	cytosol	4.67	64.71
HORVU3Hr1G068570.1	Barley	cytosol	4.24	62.5
VIT_00s0183g00140.t01	Wine grape	cytosol	6.65	60.26
PGSC0003DMT400043836	Potato	cytosol	20.23	59.58
VIT_00s0342g00030.t01	Wine grape	cytosol	5.09	58.06
VIT_16s0039g01050.t01	Wine grape	cytosol	5.09	57.14
VIT_00s0279g00080.t01	Wine grape	cytosol	11.32	55.94
VIT_16s0115g00440.t01	Wine grape	cytosol	11.17	55.24
HORVU5Hr1G018620.1	Barley	cytosol	7.21	43.97
HORVU2Hr1G050980.2	Barley	mitochondrion, plastid	34.09	36.68
HORVU1Hr1G045720.1	Barley	plastid	34.37	33.42
HORVU3Hr1G102340.13	Barley	plastid	8.49	25.0

Protein Annotations

Gene3D:3.40.50.10380	Gene3D:3.40.50.720	MapMan:5.1.1.4	UniProt:A0A287LHL6	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004470	GO:GO:0004471	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0046872	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:HORVU3Hr1G068600	EnsemblPlants:HORVU3Hr1G068600.2
InterPro:IPR037062	InterPro:Malic_NAD-bd	InterPro:Malic_N_dom	InterPro:Malic_N_dom_sf	InterPro:Malic_OxRdtase	InterPro:Malic_enzyme_CS
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00390	PFAM:PF03949	PIRSF:PIRSF000106	PRINTS:PR00072	ScanProsite:PS00331
PANTHER:PTHR23406	PANTHER:PTHR23406:SF36	SMART:SM00919	SMART:SM01274	SUPFAM:SSF51735	SUPFAM:SSF53223
UniParc:UPI000B484C4D	SEG:seg	:	:	:	:

Description

Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A287LHL6]

Coordinates

chrchr3H:-:519932794..519938335

Molecular Weight (calculated)

77750.4 Da

IEP (calculated)

8.539

GRAVY (calculated)

-0.204

Length

707 amino acids

Sequence
(BLAST)

001: QSRRKPTTFQ ASTCFPPPRS TPSAAGARRL AVAVRAVAGG ARSAAAMRAR FLPLLARQWQ WRYQGSSSSG ARRGCCGCHL CGETRRGLAA AAARWWHAGR
101: RGFVASAESG AKGEMESTMK EIRGCGAPCV LDMDDAATVG GGVEDTYGED RATEEQLVTP WTVSVASGYN LLRDPRYNKG LAFTEKERET HYLRGLLPPI
201: VISQELQERK IMHNIRQYQL PLQRYMAMMD LQEGNERLFY KLLIDNVEEL LPIVYTPTVG EACQKYGSIF SRPQGLYISL KEKGKILEVL KNWPERSIQV
301: IVVTDGERIL GLGDLGCQGM GIPVGKLSLY TALGGVRPSA CLPITLDVGT NNEELLKDEF YIGLRQRRAT GQEYADFLHE FMAAVKQNYG EKVLIQFEDF
401: ANHNAFDLLA RYGTTHLVFN DDIQGTASVV LAGLVAALKL VGGTLAEHTY LFLGAGEAGT GIAELIALEM SRQTKKPIDE CRKKIWLVDS KGLIVSARKE
501: SLQHFKKPWA HEHEHVSNLL DAVNAIKPTV LIGTSGKGQT FTQEVVEAIS SFNEMPIILA LSNPTSQAEC TAEQAYTWSK GRAVFATGSP FDPVEYNGKI
601: HVPGQANNAY IFPGFGLGVV MSGAIRVHDD MLLAASEALA QQVTQENFDK GLIYPPFSNI RKISAHIAAN VAAKAYELGL ASRRPRPKDL VKYAESCMYS
701: PIYRNYR

Best Arabidopsis Sequence Match ( AT5G25880.1 )
(BLAST)

001: MGTNQTQISD EYVTGNSSGV GGGISDVYGE DSATLDQLVT PWVTSVASGY TLMRDPRYNK GLAFTDKERD AHYITGLLPP VVLSQDVQER KVMHNLRQYT
101: VPLQRYMALM DLQERNERLF YKLLIDNVEE LLPVVYTPTV GEACQKYGSI YRRPQGLYIS LKEKGKILEV LKNWPQRGIQ VIVVTDGERI LGLGDLGCQG
201: MGIPVGKLSL YTALGGIRPS ACLPITIDVG TNNEKLLNNE FYIGLKQKRA NGEEYAEFLQ EFMCAVKQNY GEKVLVQFED FANHHAFELL SKYCSSHLVF
301: NDDIQGTASV VLAGLIAAQK VLGKSLADHT FLFLGAGEAG TGIAELIALK ISKETGKPID ETRKKIWLVD SKGLIVSERK ESLQHFKQPW AHDHKPVKEL
401: LAAVNAIKPT VLIGTSGVGK TFTKEVVEAM ATLNEKPLIL ALSNPTSQAE CTAEEAYTWT KGRAIFASGS PFDPVQYDGK KFTPGQANNC YIFPGLGLGL
501: IMSGAIRVRD DMLLAASEAL ASQVTEENFA NGLIYPPFAN IRKISANIAA SVGAKTYELG LASNLPRPKD LVKMAESCMY SPVYRNFR

Arabidopsis Description

NADP-ME3Malic enzyme [Source:UniProtKB/TrEMBL;Acc:A0A178UAR6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.